Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neobellieria_20bullata_20[genbank_20GCA_5F001017455.1_202015-06-01] 184,347 sequences; 396,224,597 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq181649 176 9e-39 seq74093 141 2e-28 >seq181649 Length=1561 Score = 176 bits (194), Expect = 9e-39 Identities = 431/647 (67%), Gaps = 11/647 (2%) Strand=Plus/Plus Query 35157 GAACTGGAACAGGAACTCTATCCATTTTTGGACCCCAAATGAGGTTCTCTCTTCGAGACG 35216 ||||||| || || || || |||||||| |||||||| | || | | ||| | Sbjct 286 GAACTGGTGTTGGCACCCTTTCAATTTTTGGTGCCCAAATGCGTTTTGATATGCGAAATT 345 Query 35217 ACACTATTCCAGTTCTCACTACCAAGAAAATTTTCTGGAGAGGAGTTGTGGAAGAACTCT 35276 | ||||| | || ||||||||| | | || ||||||| || | ||||||||| Sbjct 346 ---CATTTCCATTACTGACTACCAAGCGAGTATTTTGGAGAGCCGTGGCGGAAGAACTAC 402 Query 35277 CGTGGTTCATCAGGGGCAATACAGACGCCAAAGAATTGGCCAAGAAGAAGATACACATCT 35336 ||||| ||| ||| || || || |||| |||| |||| || || || || | Sbjct 403 TATGGTTTATCCATGGCTGCACCGATGCAAAAGTATTGCAAGAGAAAAACATTCATATTT 462 Query 35337 GGAACGCTAATGGGTCGCGGGAATTTTTGGACAGTAGAGGGTTATACGATAGAGCAGAGG 35396 || | | |||| | ||| ||||| |||| | ||| || |||| | | ||| | Sbjct 463 GGGATGGTAATAGTGATCGGCAATTTCTGGATAAATTAGGTTTCACCGATCGTGAAGAAG 522 Query 35397 GAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAATATGATACCT 35456 | |||||||| || || || || || ||||||||||||||||| || | ||| || | Sbjct 523 GCGATTTGGGTCCAGTTTATGGTTTTCAATGGCGTCATTTTGGCGCCAAGTATCGCACTT 582 Query 35457 GTTCTTCCGATTA-TACTGGAA--AGGGTATTGATCAATTGGCCAATATACTAAAGACCC 35513 || |||| | ||| || |||| |||||||| || | || | || ||| Sbjct 583 GTCA---CGATGACTACACCAATGAGGGAGTTGATCAACTGAAAGAGGTAATCAATACCA 639 Query 35514 TGAGAGAAAATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTATGGATCTTC 35573 | | || || |||| || | || || ||| | || |||||||| | ||| | | Sbjct 640 TACGCACCAACCCTAATGACCGACGCATTATAATGTCTGCCTGGAATCCCGTTGATATAC 699 Query 35574 ACCTTATGGCTCTTCCTCCATGCCACATGACTG-CTCAATTTTATGTGGCTAATGGAGAA 35632 || |||||| | ||||| || ||| || || | ||||||| |||||||||||| ||| Sbjct 700 CCCAAATGGCTTTGCCTCCCTGTCAC-TGTTTGGCGCAATTTTTTGTGGCTAATGGTGAA 758 Query 35633 TTGTCGTGCCAGTTGTATCAGCGAAGCGGAGATGTCGGGTTGGGCGTGCCCTTCAATATT 35692 | || || ||||| ||||| || || | ||| | || | || ||||| || ||||| Sbjct 759 CTATCCTGTCAGTTATATCAACGTAGTGCGGATATGGGTCTTGGAGTGCCGTTTAATATC 818 Query 35693 GCATCATACTCTCTTCTGACTCATCTGATGGCCAGTATGGTGGGTCTAAAACCGGGAGAG 35752 || || || |||| || || | |||| ||| ||| ||| | ||||| ||||| Sbjct 819 GCTTCGTATGCTCTGCTAACCTACATGATAGCCCATATTACCGGTTTGAAACCAGGAGAA 878 Query 35753 TTTATCCTCACTCTTGGTGACGCACACATTTATAATACCCACATTGA 35799 ||| | | ||| ||| || | || | ||||| || |||||||| Sbjct 879 TTTGTGCATACTACTGGCGATACTCATGTCTATAAAACGCACATTGA 925 >seq74093 Length=5834 Score = 141 bits (156), Expect = 2e-28 Identities = 245/352 (70%), Gaps = 8/352 (2%) Strand=Plus/Plus Query 101902 TTTGGCGGAACTAATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATT 101961 ||||||| ||| || |||| |||||||| |||||||| || ||||| ||||| || Sbjct 1498 TTTGGCG-AACGCATCATTGCTTTTGCTGCTGTTGAAGGTATATTCTTCAGTGGAAGTTT 1556 Query 101962 CGCATCCATTTTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGA 102021 ||| || || || ||| | ||||| | ||| || |||| ||||| || | ||| ||||| Sbjct 1557 CGCTTCTATATTTTGGTTGAAGAAACGTGGTCTTATGCCCGGTCTTACATTCTCTAATGA 1616 Query 102022 GTTCATTTCTAGGGACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGG 102081 || || ||| | || || || | || | || |||||| | |||| ||| | Sbjct 1617 ATTGATCTCTCGTGATGAGGGCTTACACTGTGATTTTGCAGTGTTAATGTTCAAACA--- 1673 Query 102082 TTTTGTTGATAC--CCCATCAAGAGAAAGGATTCTTGAAATTGTCACTGAAGCCGTCCGA 102139 |||| || || || | |||| || |||||| |||||||| | | || || || | Sbjct 1674 -TTTGGTGCAACGTCCAAGCAAG-GAGAGGATTATTGAAATTATTTCAGAGGCTGTTAAA 1731 Query 102140 ATTGAACAAGAATTTCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAG 102199 ||||||||||| || | || | | ||||||||||| | ||| | || ||||| || Sbjct 1732 ATTGAACAAGAGTTCTTAACTGATGCCCTGCCTGTTGATTTAATTGGCATGAATTGTGGA 1791 Query 102200 TTGATGAGCCAGTACATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGG 102251 || ||| | | || ||||||||||| || ||| |||| || ||| ||| Sbjct 1792 TTAATGTCCGAATATATTGAATTTGTTGCTGATCGCTTATTAGTGGAATTGG 1843 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 987246656091385