Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neobellieria_20bullata_20[genbank_20GCA_5F001017455.1_202015-06-01] 184,347 sequences; 396,224,597 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq74093 282 5e-71 >seq74093 Length=5834 Score = 282 bits (312), Expect = 5e-71 Identities = 498/721 (69%), Gaps = 5/721 (1%) Strand=Plus/Minus Query 33397 CCAATTC-AGAAATCAATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAA 33455 ||||||| | ||| || | ||| || || ||||| |||||| ||| | | ||||| Sbjct 1843 CCAATTCCACTAAT-AAGCGATCAGCAACAAATTCAATATATTCGGACATTAATCCACAA 1785 Query 33456 TTCATTCCTATGAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATACC 33515 ||||| || || | | ||| || || || |||| | || ||||||||||| || Sbjct 1784 TTCATGCCAATTAAATCAACAGGCAGGGCATCAGTTAAGAACTCTTGTTCAATTTTAACA 1725 Query 33516 GCATTTGTTATAATAAATCTAACGGTTTCTTCACTCGGTGGATGTAATAAATGTTTAAAC 33575 || | || ||||| ||| | || | || || | || | |||||||| ||| Sbjct 1724 GCCTCTGAAATAATTTCAATAATCCTCTCCTTGCTTGGACGTTGCACCAAATGTTTGAAC 1665 Query 33576 ATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAAC 33635 || || ||| ||||| ||||| | ||||| || | | || ||||| ||||| || Sbjct 1664 ATTAACACTGCAAAATCACAGTGTAAGCCCTCATCACGAGAGATCAATTCATTAGAGAAT 1605 Query 33636 GTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAA 33695 || || |||||||| || ||||| || || | ||||||||| |||||||| ||| Sbjct 1604 GTAAGACCGGGCATAAGACCACGTTTCTTCAACCAAAATATAGAAGCGAAACTTCCACTG 1545 Query 33696 AAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGC--TGT 33753 ||||| || ||||| || |||||||| ||||| | | || ||| | || | | Sbjct 1544 AAGAATATACCTTCAACAGCAGCAAAAGCAATGATGCGTTCGCCAAAGTTTGCTGATTTT 1485 Query 33754 CATGTA-TCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATG 33812 | | | |||| | ||||||||| || || ||| || ||||| ||||| | | Sbjct 1484 GAGGAAATCCAGGCTAAAGCCCAATCAGCTTTACGTTTAACGGCCGGCATTGTTTCAACG 1425 Query 33813 GCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTA 33872 |||||||| || || | | || | | ||||| ||| || ||||| ||||||| || Sbjct 1424 GCATTAAATAGGTACTCTCGTTGGTCATTATCTGTAATGTAGGTATCAATCAAAATGCTG 1365 Query 33873 TACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCG 33932 |||||||| || |||| |||||| ||||| || ||||| || |||||||| | |||||| Sbjct 1364 TACATTTCAGAGTGAACGTTTTCCATGGCTATTTGAAAACCATAGAAACAACGAGCCTCA 1305 Query 33933 GTAATCTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTG 33992 |||| || ||||| | || ||||| | | ||||||||| ||||| || || Sbjct 1304 GTAACTTGAACTTCCTGGGAGAAGCGTTCAACCAGATTTTCATTGACTATACCGTCGGAA 1245 Query 33993 GCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTC 34052 || |||||||| ||||| |||||| ||||||| ||| | || ||| ||||| Sbjct 1244 GCAGCAAAAAAGGCCAAAACATGTGAAATAAAATGACGTTCATTGTCGGTAAGTCTATTC 1185 Query 34053 CAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCC 34112 ||||| ||||| ||| | |||||||||||| || |||||||| || || || ||| Sbjct 1184 CAATCGGACATATCAGAAGAGAGATCCACTTCTTCTACAGTCCAAAAAGAGGCTTCAGCC 1125 Query 34113 T 34113 | Sbjct 1124 T 1124 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628366287686160