Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neobellieria_20bullata_20[genbank_20GCA_5F001017455.1_202015-06-01] 184,347 sequences; 396,224,597 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq74093 242 3e-59 >seq74093 Length=5834 Score = 242 bits (268), Expect = 3e-59 Identities = 479/701 (68%), Gaps = 11/701 (2%) Strand=Plus/Minus Query 11455 TAATAATCTATCTGCGACGAATTCTATATACTGAGACATTAAACAACAATTCATACCTAT 11514 |||||| | ||| || || ||||| ||||| | |||||||| | ||||||||| || || Sbjct 1833 TAATAAGCGATCAGCAACAAATTCAATATATTCGGACATTAATCCACAATTCATGCCAAT 1774 Query 11515 AAGATCCACCGGAATAGCAACTGTCAAAAACTCCTTTTCTATATTAACCGCATC---AAT 11571 | ||| || || | ||| | || || ||||| | ||| || ||||| || || ||| Sbjct 1773 TAAATCAACAGGCAGGGCATCAGTTAAGAACTCTTGTTCAATTTTAACAGCCTCTGAAAT 1714 Query 11572 GATTATCGACGTTATAACTTCCTTAGATGGTGGATGTAATAAATGTTTAAACATTAAACA 11631 ||| || | | || ||||| ||| | || | |||||||| |||||||| || Sbjct 1713 AATT-TCAA--TAATCCTCTCCTTGCTTGGACGTTGCACCAAATGTTTGAACATTAA-CA 1658 Query 11632 C-GCAAAATCACAATGTAAACCTTCGTCTCTACTTATTAGTTCATTAGAAAATGTTAATC 11690 | ||||||||||| ||||| || || || | | || | ||||||||| ||||| | | Sbjct 1657 CTGCAAAATCACAGTGTAAGCCCTCATCACGAGAGATCAATTCATTAGAGAATGTAAGAC 1598 Query 11691 CGGGCATCAATCCTCGtttttttATCCAAAATATAGCAGCAAATGAACCAGAAAAGAATA 11750 ||||||| | || ||||| || | ||||||||||| ||| || ||| ||||||| Sbjct 1597 CGGGCATAAGACCACGTTTCTTCAACCAAAATATAGAAGCGAAACTTCCACTGAAGAATA 1538 Query 11751 TTCCCTCCACAGCTGCAAATGCTACTACTCTTTCTCCATA--TACCTTGTTGCTA-GATA 11807 | || || ||||| ||||| || | | | ||| ||| | | || || | || | Sbjct 1537 TACCTTCAACAGCAGCAAAAGCAATGATGCGTTCGCCAAAGTTTGCTGATTTTGAGGAAA 1478 Query 11808 TCCATTTTCTGGCCCAATCAGCTTTCTTTTTTACGCATTCCATTGTTTCTATAGCGTTAA 11867 |||| | |||||||||||||| ||| ||| ||||||||| | || |||| Sbjct 1477 TCCAGGCTAAAGCCCAATCAGCTTTACGTTTAACGGCCGGCATTGTTTCAACGGCATTAA 1418 Query 11868 ATAAATGCATTTTTTCTATATTATCTCTTACATATGTATCTATTAATAAACTATACATTT 11927 ||| | | | || ||||||| | | || ||||| || || | || ||||||| Sbjct 1417 ATAGGTACTCTCGTTGGTCATTATCTGTAATGTAGGTATCAATCAAAATGCTGTACATTT 1358 Query 11928 CTGAATGAATATTTTCCATAGCTATTTGAAATCCATAGAAACATCGTGCCTCTGAACACT 11987 | || |||| |||||||| ||||||||||| ||||||||||| || ||||| | | | Sbjct 1357 CAGAGTGAACGTTTTCCATGGCTATTTGAAAACCATAGAAACAACGAGCCTCAGTAACTT 1298 Query 11988 GTACATCCACATAAAATCTTTCCGCTAAATTCTCATTTACAATACCATCACTAGATGCAA 12047 | || ||| | || | ||| | | ||| ||||| || ||||| || || |||| Sbjct 1297 GAACTTCCTGGGAGAAGCGTTCAACCAGATTTTCATTGACTATACCGTCGGAAGCAGCAA 1238 Query 12048 AAAATGCTAGTATATGTTTTATAAAGTATTTTTCGTCTTTAGTTAATTTATCCCAATCAT 12107 |||| || | | |||| ||||| | ||| | | || | | ||| |||||| Sbjct 1237 AAAAGGCCAAAACATGTGAAATAAAATGACGTTCATTGTCGGTAAGTCTATTCCAATCGG 1178 Query 12108 CTAAATCTTTTGATAAATCTACTTCTTCAACGGTCCAAAAA 12148 | ||| || | ||| |||||||| || ||||||||| Sbjct 1177 ACATATCAGAAGAGAGATCCACTTCTTCTACAGTCCAAAAA 1137 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 467445160733680