Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neobellieria_20bullata_20[genbank_20GCA_5F001017455.1_202015-06-01] 184,347 sequences; 396,224,597 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq7894 131 2e-25 seq175855 95.1 1e-14 seq47065 89.7 5e-13 >seq7894 Length=2644 Score = 131 bits (144), Expect = 2e-25 Identities = 168/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 ||| || || |||||||| || || || | ||||| ||||||||||| || ||||| Sbjct 2538 GCCACCACGCAAACGCAATACCAAATGCAATGTAGATTCTTTTTGAATATTGTAATCAGA 2479 Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 || ||||| | |||||| | ||||| ||||| |||| | |||||| ||||| ||||| Sbjct 2478 CAATGTGCGCCCGTCTTCCAATTGTTTGCCAGCGAAGATTAAACGTTGTTGATCTGGAGG 2419 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGC-TGTTCCACTGTGTCGGTGGGCTCCA 139715 || ||||| ||||| ||| |||| | |||| | | ||| | || |||| ||||| | Sbjct 2418 GATTCCTTCCTTGTC-TTGAATTTTAGCTTTAACATTTTCAATAGTATCGGAAGGCTCAA 2360 Query 139716 CCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 |||| | || | || ||||| |||| || || || || |||||||| Sbjct 2359 CCTCTAAAGTGATGGTTTTGCCAGTCAGTGTCTTGACAAAGATTTGCAT 2311 >seq175855 Length=19510 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || | ||| | ||| || || | || || || ||||| ||||| || ||| | Sbjct 16653 CCACCACGAAGACGGAGAACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCGGAC 16594 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| ||||| | || |||||||| |||||| |||||| ||||| || || Sbjct 16593 AAGGTGCGACCATCTTCCAATTGCTTACCAGCGAAGATCAAACGTTGTTGATCTGGGGGG 16534 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 || ||||||||||| |||||| || | | ||| | ||||||| ||||| || Sbjct 16533 ATACCTTCTTTGTCTTGGATTTTAGCCTTGACATTTTCAATAGTGTCGGAAGGCTCAACT 16474 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 || | ||| | || || || || | ||||| ||||| || ||||| Sbjct 16473 TCCAAGGTGATGGTTTTACCAGTTAGAGTTTTGACGAAGATCTGCAT 16427 >seq47065 Length=7920 Score = 89.7 bits (98), Expect = 5e-13 Identities = 155/220 (70%), Gaps = 4/220 (2%) Strand=Plus/Minus Query 139550 CGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGC-TCGA 139608 || || ||||| || | || || || ||||| ||||| |||||| | || | || | Sbjct 2869 CGTAACACTAAATGCAAAGTTGATTCCTTTTGGATGTTGTAATCGGATAGGGTACGTCCA 2810 Query 139609 GTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTT 139668 ||||| | ||||| |||||| | || |||||||||||||| || || || || ||||| Sbjct 2809 -TCTTCCAATTGTTTTCCAGCAAAAATTAGACGTTGCTGATCTGGTGGAATTCCCTCTTT 2751 Query 139669 GTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCA 139727 ||| ||| | || | ||| | | ||| | || || | || || ||||||| || | Sbjct 2750 GTC-CTGAATCTTGGCTTTGACATTTTCGATAGTATCAGAAGGTTCGACCTCAAGTGTAA 2692 Query 139728 CCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATAGC 139767 |||||||| || | || ||||| || || ||||| || Sbjct 2691 TGGTCTTGCCCGTTAGGGTCTTTACAAAAATCTGCATTGC 2652 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494920901122400