Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neobellieria_20bullata_20[genbank_20GCA_5F001017455.1_202015-06-01] 184,347 sequences; 396,224,597 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq74093 316 2e-81 >seq74093 Length=5834 Score = 316 bits (350), Expect = 2e-81 Identities = 506/720 (70%), Gaps = 15/720 (2%) Strand=Plus/Minus Query 13681 CACAACCTAGTTCTAATAGTAATCTATCAGCAATAAACTCAATATATTGAGACATTAAAT 13740 |||| || | ||| | || ||| | |||||||| ||| |||||||||| |||||||| Sbjct 1848 CACATCCAA-TTCCACTAATAAGCGATCAGCAACAAATTCAATATATTCGGACATTAATC 1790 Query 13741 CACAATTCATACCTATTAGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAG 13800 |||||||||| || |||| | ||||| | || ||||| || |||| ||| || Sbjct 1789 CACAATTCATGCCAATTAAATCAACAGGCAGGGCATCAGTTAAGAACTCTTGTTCAATTT 1730 Query 13801 ACACAGCCTCTTTTATAATAATTGTAATAATC---TCATTAGAAGGAGGATATTTTAGAT 13857 ||||||||| ||||||| ||||||| || || ||| | | | || Sbjct 1729 TAACAGCCTCTGA---AATAATTTCAATAATCCTCTCCTTGCTTGGACGTTGCACCAAAT 1673 Query 13858 GTTTAAAAATTAAACAC-GCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCG 13916 |||| || ||||| ||| ||||||||||| || | ||||||||| | | || | ||| Sbjct 1672 GTTTGAACATTAA-CACTGCAAAATCACAGTGTAAGCCCTCATCACGAGAGATCAATTCA 1614 Query 13917 TTTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCAAAT 13976 || || ||||| | || ||||| | || ||||| || ||||||||||| | ||| || Sbjct 1613 TTAGAGAATGTAAGACCGGGCATAAGACCACGTTTCTTCAACCAAAATATAGAAGCGAAA 1554 Query 13977 GACCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGAT 14036 || |||||||| || ||||| |||||||| || || | ||||| ||||| | Sbjct 1553 CTTCCACTGAAGAATATACCTTCAACAGCAGCAAAAGCAATGATGCGTTCGCCAAAGTTT 1494 Query 14037 GCTTTTTTGTTCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATT 14096 ||| ||| || ||||| | |||||| |||| ||| ||||| |||| Sbjct 1493 GCTGATTTTGAGGAAATCCAGGCTAAAGCCCAATCAGCTTTACGTTTAACGGCCGGCATT 1434 Query 14097 GTTTCAATAGCATTAAATAAATATTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATA 14156 ||||||| |||||||||| || || | | | || || |||||| |||||||| Sbjct 1433 GTTTCAACGGCATTAAATAGGTACTCTCGTTGGTCATTATCTGTAATGTAGGTATCAATC 1374 Query 14157 AGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCAT 14216 | | ||| |||||||||||||| | ||||||||| ||||| ||||||||||| || || Sbjct 1373 AAAATGCTGTACATTTCAGAGTGAACGTTTTCCATGGCTATTTGAAAACCATAGAAACAA 1314 Query 14217 CTAGCTTCCGACCATTGTACTTCCGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATA 14276 | ||| || | ||| |||||| | | || | ||| ||| ||||||||| |||||| Sbjct 1313 CGAGCCTCAGTAACTTGAACTTCCTGGGAGAAGCGTTCAACCAGATTTTCATTGACTATA 1254 Query 14277 CCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTG 14336 || || ||| |||||||| ||||| | | | |||||| | | |||||||| | Sbjct 1253 CCGTCGGAAGCAGCAAAAAAGGCCAAAACATGTGAAATAAAATGACG---TTCATTGTCG 1197 Query 14337 ---AGTTTTTTCCAATCGGATAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAA 14393 ||| | ||||||||||| | ||| ||| ||||| ||||| || || ||||||||| Sbjct 1196 GTAAGTCTATTCCAATCGGACATATCAGAAGAGAGATCCACTTCTTCTACAGTCCAAAAA 1137 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478622544779800