Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neobellieria_20bullata_20[genbank_20GCA_5F001017455.1_202015-06-01] 184,347 sequences; 396,224,597 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq74093 298 5e-76 >seq74093 Length=5834 Score = 298 bits (330), Expect = 5e-76 Identities = 506/724 (70%), Gaps = 23/724 (3%) Strand=Plus/Minus Query 13469 CACAACCTAGTTCTAATAATAATCTATCAGCAATAAACTCAATATATTGAGACATTAAAT 13528 |||| || | ||| | |||||| | |||||||| ||| |||||||||| |||||||| Sbjct 1848 CACATCCAA-TTCCACTAATAAGCGATCAGCAACAAATTCAATATATTCGGACATTAATC 1790 Query 13529 CACAATTCATACCTATTAGTTTTACAGGAATTATATTAGTTAAAAATTCTTTTTCTATAG 13588 |||||||||| || |||| | ||||| | || |||||| || |||| ||| || Sbjct 1789 CACAATTCATGCCAATTAAATCAACAGGCAGGGCATCAGTTAAGAACTCTTGTTCAATTT 1730 Query 13589 ACACAGCCTCGTTTATAATAATCTTAATAATG---TCATTAGAAGGAGGATATTTTAGAT 13645 |||||||| | |||||| | |||||| || || ||| | | | || Sbjct 1729 TAACAGCCTC---TGAAATAATTTCAATAATCCTCTCCTTGCTTGGACGTTGCACCAAAT 1673 Query 13646 GTTTAAAAATTAAACAC-GCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCG 13704 |||| || ||||| ||| ||||||||||| || | ||||||||| | | || | ||| Sbjct 1672 GTTTGAACATTAA-CACTGCAAAATCACAGTGTAAGCCCTCATCACGAGAGATCAATTCA 1614 Query 13705 TTTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAAT 13764 || || ||||| | || ||||| | || ||||| || ||||||||||| | |||||| Sbjct 1613 TTAGAGAATGTAAGACCGGGCATAAGACCACGTTTCTTCAACCAAAATATAGAAGCGAAA 1554 Query 13765 GATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGAT 13824 ||| |||||||| || ||||| |||||||| || || | ||||| ||||| | Sbjct 1553 CTTCCACTGAAGAATATACCTTCAACAGCAGCAAAAGCAATGATGCGTTCGCCAAAGTTT 1494 Query 13825 GCTTTTTTGTTTGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATT 13884 ||| ||| || ||||| | |||||| |||| ||| ||||| |||| Sbjct 1493 GCTGATTTTGAGGAAATCCAGGCTAAAGCCCAATCAGCTTTACGTTTAACGGCCGGCATT 1434 Query 13885 GTTTCGATTGCATTGAATAAATGTTCCTTCTCTTTAGTACTT----GAAATGTATGTATC 13940 ||||| | ||||| |||| || | |||| || || || | |||||| ||||| Sbjct 1433 GTTTCAACGGCATTAAATAG--GTAC--TCTCGTTGGTCATTATCTGTAATGTAGGTATC 1378 Query 13941 AATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAA 14000 ||| | | ||| |||||||||||||| | |||||| || ||||| ||||||||||| || Sbjct 1377 AATCAAAATGCTGTACATTTCAGAGTGAACGTTTTCCATGGCTATTTGAAAACCATAGAA 1318 Query 14001 ACATCTAGCTTCTGACCATTGTACCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAAC 14060 ||| | ||| || | ||| || ||| | | || | ||| ||| |||||||| || Sbjct 1317 ACAACGAGCCTCAGTAACTTGAACTTCCTGGGAGAAGCGTTCAACCAGATTTTCATTGAC 1258 Query 14061 AATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATT 14120 ||||| || ||| |||||||| ||||| | | | ||||| | || |||||| Sbjct 1257 TATACCGTCGGAAGCAGCAAAAAAGGCCAAAACATGTGAAATAA---AATGACGTTCATT 1201 Query 14121 GT---TGAGTTTTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCA 14177 || | ||| | |||||||||| | ||| ||| ||||| ||||| || || ||||| Sbjct 1200 GTCGGTAAGTCTATTCCAATCGGACATATCAGAAGAGAGATCCACTTCTTCTACAGTCCA 1141 Query 14178 AAAA 14181 |||| Sbjct 1140 AAAA 1137 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 477485969881080