Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neobellieria_20bullata_20[genbank_20GCA_5F001017455.1_202015-06-01] 184,347 sequences; 396,224,597 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq74093 282 6e-71 >seq74093 Length=5834 Score = 282 bits (312), Expect = 6e-71 Identities = 498/721 (69%), Gaps = 5/721 (1%) Strand=Plus/Minus Query 41880 CCAATTC-AGAAATCAATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAA 41938 ||||||| | ||| || | ||| || | ||||| |||||| ||| | | ||||| Sbjct 1843 CCAATTCCACTAAT-AAGCGATCAGCAACAAATTCAATATATTCGGACATTAATCCACAA 1785 Query 41939 TTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACC 41998 ||||| || || | | ||| || || || |||| | || ||||||||||| || Sbjct 1784 TTCATGCCAATTAAATCAACAGGCAGGGCATCAGTTAAGAACTCTTGTTCAATTTTAACA 1725 Query 41999 GCGTCTGTTATAATAGATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAAC 42058 || |||| ||||| | | | || | || || | | || |||||||| ||| Sbjct 1724 GCCTCTGAAATAATTTCAATAATCCTCTCCTTGCTTGGACGTTGCACCAAATGTTTGAAC 1665 Query 42059 ATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAAC 42118 || || ||| ||||| ||||| | |||||||| | | || ||||| || || || Sbjct 1664 ATTAACACTGCAAAATCACAGTGTAAGCCCTCATCACGAGAGATCAATTCATTAGAGAAT 1605 Query 42119 GTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAA 42178 || || |||||||| || ||||| || || | |||||||||||| || || |||| Sbjct 1604 GTAAGACCGGGCATAAGACCACGTTTCTTCAACCAAAATATAGAAGCGAAACTTCCACTG 1545 Query 42179 AAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGC--ACTGT 42236 ||||| || ||||| || || ||||| ||||| | | || ||| | || | | | Sbjct 1544 AAGAATATACCTTCAACAGCAGCAAAAGCAATGATGCGTTCGCCAAAGTTTGCTGATTTT 1485 Query 42237 CATGTA-TCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATG 42295 | | | |||| | ||||||||| || || ||| || ||||| ||||| | | Sbjct 1484 GAGGAAATCCAGGCTAAAGCCCAATCAGCTTTACGTTTAACGGCCGGCATTGTTTCAACG 1425 Query 42296 GCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTA 42355 |||||||| || || | | || | | ||||| ||| || ||||| ||||||| || Sbjct 1424 GCATTAAATAGGTACTCTCGTTGGTCATTATCTGTAATGTAGGTATCAATCAAAATGCTG 1365 Query 42356 TACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCG 42415 |||||||| || |||| |||||| ||||| || ||||| || |||||||| | ||||| Sbjct 1364 TACATTTCAGAGTGAACGTTTTCCATGGCTATTTGAAAACCATAGAAACAACGAGCCTCA 1305 Query 42416 GTAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTG 42475 ||||| || ||||| | || |||||| | | |||||| || ||||| ||||| Sbjct 1304 GTAACTTGAACTTCCTGGGAGAAGCGTTCAACCAGATTTTCATTGACTATACCGTCGGAA 1245 Query 42476 GCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAATTTATTC 42535 || |||||||| ||||| |||||| ||||||| ||| | || | | ||||| Sbjct 1244 GCAGCAAAAAAGGCCAAAACATGTGAAATAAAATGACGTTCATTGTCGGTAAGTCTATTC 1185 Query 42536 CAATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCC 42595 ||||| ||||| ||| | ||| ||||||||||| |||||||| || ||||| ||| Sbjct 1184 CAATCGGACATATCAGAAGAGAGATCCACTTCTTCTACAGTCCAAAAAGAGGCTTCAGCC 1125 Query 42596 T 42596 | Sbjct 1124 T 1124 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 669592668773720