Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neobellieria_20bullata_20[genbank_20GCA_5F001017455.1_202015-06-01] 184,347 sequences; 396,224,597 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq7894 141 9e-29 seq47065 109 6e-19 seq175855 98.7 1e-15 >seq7894 Length=2644 Score = 141 bits (156), Expect = 9e-29 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 142957 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 143016 ||| || || |||||||| || ||||| | ||||||||||||||| || |||||||| Sbjct 2538 GCCACCACGCAAACGCAATACCAAATGCAATGTAGATTCTTTTTGAATATTGTAATCAGA 2479 Query 143017 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076 || ||||| | |||||| | |||||| ||||| |||| | |||||| ||||| ||||| Sbjct 2478 CAATGTGCGCCCGTCTTCCAATTGTTTGCCAGCGAAGATTAAACGTTGTTGATCTGGAGG 2419 Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136 || ||||| ||||| |||||| ||| | | ||| | || || | || || || Sbjct 2418 GATTCCTTCCTTGTCTTGAATTTTAGCTTTAACATTTTCAATAGTATCGGAAGGCTCAAC 2359 Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 || | ||| | || ||||| |||| ||| || || || |||||||| Sbjct 2358 CTCTAAAGTGATGGTTTTGCCAGTCAGTGTCTTGACAAAGATTTGCAT 2311 >seq47065 Length=7920 Score = 109 bits (120), Expect = 6e-19 Identities = 157/219 (72%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 142970 CGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGC-TCGA 143028 || || |||||||| | || ||||| ||||| |||||||||||| | || | || | Sbjct 2869 CGTAACACTAAATGCAAAGTTGATTCCTTTTGGATGTTGTAATCGGATAGGGTACGTCCA 2810 Query 143029 GTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTT 143088 ||||| | |||||| |||||| | || |||||||||||||| || || || || ||||| Sbjct 2809 -TCTTCCAATTGTTTTCCAGCAAAAATTAGACGTTGCTGATCTGGTGGAATTCCCTCTTT 2751 Query 143089 GTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCAC 143148 ||| ||| || ||| | | ||| | || || | ||||| || |||| || | Sbjct 2750 GTCCTGAATCTTGGCTTTGACATTTTCGATAGTATCAGAAGGTTCGACCTCAAGTGTAAT 2691 Query 143149 CGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATAGC 143187 |||||||| || | || ||||| || || ||||| || Sbjct 2690 GGTCTTGCCCGTTAGGGTCTTTACAAAAATCTGCATTGC 2652 >seq175855 Length=19510 Score = 98.7 bits (108), Expect = 1e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || || || | ||| | ||| ||||| | || ||||| ||||| |||||||| ||| | Sbjct 16653 CCACCACGAAGACGGAGAACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCGGAC 16594 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | |||| ||||| | ||| |||||||| |||||| |||||| ||||| || || Sbjct 16593 AAGGTGCGACCATCTTCCAATTGCTTACCAGCGAAGATCAAACGTTGTTGATCTGGGGGG 16534 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 || ||||||||||| ||||| || | | ||| | ||||| | || || ||| Sbjct 16533 ATACCTTCTTTGTCTTGGATTTTAGCCTTGACATTTTCAATAGTGTCGGAAGGCTCAACT 16474 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 || | || | || || || || | ||||| ||||| || ||||| Sbjct 16473 TCCAAGGTGATGGTTTTACCAGTTAGAGTTTTGACGAAGATCTGCAT 16427 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505846067705040