Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neobellieria_20bullata_20[genbank_20GCA_5F001017455.1_202015-06-01] 184,347 sequences; 396,224,597 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq7894 141 7e-29 seq47065 123 2e-23 seq175855 118 8e-22 seq145162 87.8 1e-12 >seq7894 Length=2644 Score = 141 bits (156), Expect = 7e-29 Identities = 171/230 (74%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 15135 TGCCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGC 15194 ||||||| | ||| | || || ||||| | || || |||||||| || |||||||| Sbjct 2539 TGCCACCACGCAAACGCAATACCAAATGCAATGTAGATTCTTTTTGAATATTGTAATCAG 2480 Query 15195 TTAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTG 15254 | | | | ||||||| ||||||||||||||| | || ||||||||||| || | Sbjct 2479 ACAATGTGCGCCCGTCTTCCAATTGTTTGCCAGCGAAGATTAAACGTTGTTGATCTGGAG 2420 Query 15255 GAATTCCTTCTTTGTCACAAATTTT-GCTCTTTACAATTTCTATGGTATCGCTATTTTCT 15313 | |||||||| ||||| |||||| ||| || ||| |||| || |||||| | || Sbjct 2419 GGATTCCTTCCTTGTCTTGAATTTTAGCT-TTAACATTTTCAATAGTATCGGAAGGCTCA 2361 Query 15314 ACATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 || ||||| || |||||||| || ||||| || || ||||| |||||||| Sbjct 2360 ACCTCTAAAGTGATGGTTTTGCCAGTCAGTGTCTTGACAAAGATTTGCAT 2311 Score = 104 bits (114), Expect = 2e-17 Identities = 164/235 (70%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 15135 TGCCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGC 15194 ||||||| | | | || ||| |||||||| || || || ||||| || || |||||| Sbjct 2311 TGCCACCACGAAGACGTAGAACCAAATGAAGTGTTGATTCCTTTTGAATATTATAATCGG 2252 Query 15195 TTAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTG 15254 | | | | ||||||| ||||||||||| || | || ||||||||||| || | Sbjct 2251 ACAAAGTGCGTCCGTCTTCCAATTGTTTGCCGGCAAAAATTAAACGTTGTTGATCTGGGG 2192 Query 15255 GAATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTA 15314 | || || || || || |||||| ||| || | || || ||||| | ||| | Sbjct 2191 GGATACCCTCCTTATCTTGAATTTTAGCCTTGACGTTCTCAATAGTATCAGAAGGTTCGA 2132 Query 15315 CATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATTTGA 15369 | |||||||| ||||| || || || | ||| || || || || ||||| ||||| Sbjct 2131 CCTCTAAGGTGATGGTCTTGCCAGTTAAAGTCTTCACGAAGATCTGCATTTTTGA 2077 >seq47065 Length=7920 Score = 123 bits (136), Expect = 2e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 15151 TAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTC 15210 ||| |||||||| | || || || ||||| |||||||||||| ||| | | | || Sbjct 2867 TAACACTAAATGCAAAGTTGATTCCTTTTGGATGTTGTAATCGGATAGGGTACGTCCATC 2808 Query 15211 TTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTC 15270 ||| |||||||| ||||| | || | |||||| || || ||||||||| |||||||| Sbjct 2807 TTCCAATTGTTTTCCAGCAAAAATTAGACGTTGCTGATCTGGTGGAATTCCCTCTTTGTC 2748 Query 15271 ACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGT 15330 ||| ||| || ||| |||| || ||||| | ||| || || | |||||||| Sbjct 2747 CTGAATCTTGGCTTTGACATTTTCGATAGTATCAGAAGGTTCGACCTCAAGTGTAATGGT 2688 Query 15331 TTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 || || || || || ||||||||||| ||||| Sbjct 2687 CTTGCCCGTTAGGGTCTTTACAAAAATCTGCAT 2655 >seq175855 Length=19510 Score = 118 bits (130), Expect = 8e-22 Identities = 163/227 (72%), Gaps = 2/227 (1%) Strand=Plus/Minus Query 15154 AACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTC 15213 ||| ||||| | ||||| || ||||| |||||||| ||| | | | | ||||| Sbjct 16636 AACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCGGACAAGGTGCGACCATCTTC 16577 Query 15214 TAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACA 15273 ||||| || |||||| | |||||||||||||| || || || ||||||||||| Sbjct 16576 CAATTGCTTACCAGCGAAGATCAAACGTTGTTGATCTGGGGGGATACCTTCTTTGTCTTG 16517 Query 15274 AATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTT 15333 ||||| ||| ||| |||| || || ||| | || || || ||||| |||||||| Sbjct 16516 GATTTTAGCCTTGACATTTTCAATAGTGTCGGAAGGCTCAACTTCCAAGGTGATGGTTTT 16457 Query 15334 ACCTGTCAGAGTTTTTACAAAAATTTGCATATTT--GAAAATAAAAT 15378 ||| || |||||||| || || || ||||| | | ||||| |||| Sbjct 16456 ACCAGTTAGAGTTTTGACGAAGATCTGCATCTGTAACAAAATTAAAT 16410 >seq145162 Length=2015 Score = 87.8 bits (96), Expect = 1e-12 Identities = 110/151 (73%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 91635 AATATTTCCTAAATCGCCGACGTGTCGTTCAATTGCATTTGGCGCGCCGTGATCGTGTCC 91694 |||||| || |||||||| || |||| | |||| || || || || || | || Sbjct 1972 AATATTGCCCAAATCGCCTACATGTCTATTTTCGTCATTGGGTGCCCCATGTTCTTTACC 1913 Query 91695 GGTGGGATTGAAATGCTCACCAGCAGATGTGCAACCGTTAGTTGTGTCGCCGAACTCGTG 91754 |||||||| || |||||| || |||||||| ||||| |||| || || || || Sbjct 1912 ACATGGATTGAAGTGTGGACCAGCTGAGGTGCAACCATTAGTGTTGTCACCAAATTCATG 1853 Query 91755 CACATGAAAACCGTGTAAACCCTTTGGCAAA 91785 |||||||||||||| |||||||| | |||| Sbjct 1852 AACATGAAAACCGTGCAAACCCTTGGACAAA 1822 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361365481465527