Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neobellieria_20bullata_20[genbank_20GCA_5F001017455.1_202015-06-01] 184,347 sequences; 396,224,597 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq7894 125 5e-24 seq175855 104 1e-17 seq55885 87.8 1e-12 >seq7894 Length=2644 Score = 125 bits (138), Expect = 5e-24 Identities = 159/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 33152 AACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGT 33211 || ||||| |||||||||||||| || |||||||| ||||||||||||||||| || | Sbjct 2528 AAACGCAATACCAAATGCAATGTAGATTCTTTTTGAATATTGTAATCAGACAATGTGCGC 2469 Query 33212 TGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCT 33271 ||| |||||||| || ||| || ||||||||||| || || | || || ||||| Sbjct 2468 CCGTCTTCCAATTGTTTGCCAGCGAAGATTAAACGTTGTTGATCTGGAGGGATTCCTTCC 2409 Query 33272 TTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTT 33331 || || ||| ||| || ||| ||| || ||| || | ||| || | ||| Sbjct 2408 TTGTCTTGAATTTTAGCTTTAACATTTTCAATAGTATCGGAAGGCTCAACCTCTAAAGTG 2349 Query 33332 ATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATG 33370 || ||||| || || || || || || || ||||||||| Sbjct 2348 ATGGTTTTGCCAGTCAGTGTCTTGACAAAGATTTGCATG 2310 Score = 84.2 bits (92), Expect = 1e-11 Identities = 149/216 (69%), Gaps = 6/216 (3%) Strand=Plus/Minus Query 33161 ACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATCC 33220 |||||||| | ||| || || ||||| ||||| ||||| |||||| || || ||| ||| Sbjct 2291 ACCAAATGAAGTGTTGATTCCTTTTGAATATTATAATCGGACAAAGTGCGTCCGTCTTCC 2232 Query 33221 AATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTCGCTA 33280 ||||| || || ||| ||||||||||| || || | ||| || || || || || | Sbjct 2231 AATTGTTTGCCGGCAAAAATTAAACGTTGTTGATCTGGGGGGATACCCTCCTTATCTTGA 2172 Query 33281 A---TCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTT 33337 | | ||| || || | | ||| || || |||| || || | || || || Sbjct 2171 ATTTTAGCC---TTGACGTTCTCAATAGTATCAGAAGGTTCGACCTCTAAGGTGATGGTC 2115 Query 33338 TTTCCCGTAAGAGTTTTTACGAAAATTTGCATGTTT 33373 || || || | ||| || ||||| || ||||| ||| Sbjct 2114 TTGCCAGTTAAAGTCTTCACGAAGATCTGCATTTTT 2079 >seq175855 Length=19510 Score = 104 bits (114), Expect = 1e-17 Identities = 151/212 (71%), Gaps = 6/212 (3%) Strand=Plus/Minus Query 33161 ACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATCC 33220 |||||||| || || || || ||||| || ||||| || ||||| || | || ||| Sbjct 16635 ACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCGGACAAGGTGCGACCATCTTCC 16576 Query 33221 AATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTT---TTCG 33277 |||||||| ||| || || |||||||| || || | ||| || |||||||| || | Sbjct 16575 AATTGCTTACCAGCGAAGATCAAACGTTGTTGATCTGGGGGGATACCTTCTTTGTCTTGG 16516 Query 33278 CTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTT 33337 | | ||| || || ||| ||| |||||| || | ||| |||| || || ||| Sbjct 16515 ATTTTAGCC---TTGACATTTTCAATAGTGTCGGAAGGCTCAACTTCCAAGGTGATGGTT 16459 Query 33338 TTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 || || || |||||||| ||||| || ||||| Sbjct 16458 TTACCAGTTAGAGTTTTGACGAAGATCTGCAT 16427 >seq55885 Length=1496 Score = 87.8 bits (96), Expect = 1e-12 Identities = 151/218 (69%), Gaps = 6/218 (3%) Strand=Plus/Minus Query 33155 CGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGG 33214 || ||||||||||| | ||| || || || || ||||| || || |||||| || | Sbjct 364 CGTAACACCAAATGGAGTGTAGATTCCTTCTGAATATTATAGTCCGACAAAGTGCGGCCA 305 Query 33215 TCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTT 33274 || |||||||| || || || |||||||| || || || | ||| || ||||| || Sbjct 304 TCTTCCAATTGTTTACCGGCGAAAATTAAACGCTGTTGATCTGGGGGAATACCTTCCTTA 245 Query 33275 TCGCTAATC---GCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTT 33331 || |||| ||| ||||| | | ||| || || |||| || |||| || Sbjct 244 TCCTGAATCTTGGCC---TTTACATTCTCAATAGTATCAGAAGGTTCCACTTCCAAGGTG 188 Query 33332 ATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 || |||||||| || | || || |||||||| ||||| Sbjct 187 ATGGTTTTTCCAGTCAAGGTCTTGACGAAAATCTGCAT 150 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318061393101606