Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neobellieria_20bullata_20[genbank_20GCA_5F001017455.1_202015-06-01] 184,347 sequences; 396,224,597 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq7894 107 1e-18 seq47065 87.8 1e-12 seq55885 86.0 4e-12 >seq7894 Length=2644 Score = 107 bits (118), Expect = 1e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 43913 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTCC 43972 |||||||| || || || |||||||||||||||||| || || | || ||| Sbjct 2291 ACCAAATGAAGTGTTGATTCCTTTTGAATATTATAATCGGACAAAGTGCGTCCGTCTTCC 2232 Query 43973 AATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAA 44032 |||||||| || ||||| || || ||||| || || | || | ||| || |||||| | Sbjct 2231 AATTGTTTGCCGGCAAAAATTAAACGTTGTTGATCTGGGGGGATACCCTCCTTATCTTGA 2172 Query 44033 ATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTA 44092 ||||| ||||| | ||| |||||| | || || || || | || || || || Sbjct 2171 ATTTTAGCCTTGACGTTCTCAATAGTATCAGAAGGTTCGACCTCTAAGGTGATGGTCTTG 2112 Query 44093 CCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || |||||||||||||| || || ||||| Sbjct 2111 CCAGTTAAAGTCTTCACGAAGATCTGCAT 2083 Score = 105 bits (116), Expect = 5e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 43910 AACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCG 43969 || |||||||| | || |||||||||||||| ||||| ||| ||| | || Sbjct 2522 AATACCAAATGCAATGTAGATTCTTTTTGAATATTGTAATCAGACAATGTGCGCCCGTCT 2463 Query 43970 TCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCT 44029 ||||||||||| || || || || || ||||| || || |||| | ||||| || ||| Sbjct 2462 TCCAATTGTTTGCCAGCGAAGATTAAACGTTGTTGATCTGGAGGGATTCCTTCCTTGTCT 2403 Query 44030 GAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTT 44089 |||||| ||| || | ||| |||||| | ||||| || || | || || ||| Sbjct 2402 TGAATTTTAGCTTTAACATTTTCAATAGTATCGGAAGGCTCAACCTCTAAAGTGATGGTT 2343 Query 44090 TTACCGGTTAAAGTCTTCACAAATATTTGCATG 44122 || || || | ||||| ||||| ||||||||| Sbjct 2342 TTGCCAGTCAGTGTCTTGACAAAGATTTGCATG 2310 >seq47065 Length=7920 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 43909 TAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATC 43968 |||||| ||||| | || || ||||| || || |||||| || ||| |||| Sbjct 2867 TAACACTAAATGCAAAGTTGATTCCTTTTGGATGTTGTAATCGGATAGGGTACGTCCATC 2808 Query 43969 GTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATC 44028 |||||||||||||| ||||| || | |||||||| || | || | || ||||| || Sbjct 2807 TTCCAATTGTTTTCCAGCAAAAATTAGACGTTGCTGATCTGGTGGAATTCCCTCTTTGTC 2748 Query 44029 TGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGT 44088 ||| || |||||| | | | |||||| | || || || || | ||||| || Sbjct 2747 CTGAATCTTGGCTTTGACATTTTCGATAGTATCAGAAGGTTCGACCTCAAGTGTAATGGT 2688 Query 44089 TTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || || |||| ||||| ||||| || ||||| Sbjct 2687 CTTGCCCGTTAGGGTCTTTACAAAAATCTGCAT 2655 >seq55885 Length=1496 Score = 86.0 bits (94), Expect = 4e-12 Identities = 149/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 43909 TAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATC-GTTTAATTGACGCTCAT 43967 |||||||||||| || || || || ||||||||||| || | || || || ||| Sbjct 362 TAACACCAAATGGAGTGTAGATTCCTTCTGAATATTATAGTCCGACAAAGTGCGGC-CAT 304 Query 43968 CGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTAT 44027 | ||||||||||| || || || || || || || || || | || | |||||| |||| Sbjct 303 CTTCCAATTGTTTACCGGCGAAAATTAAACGCTGTTGATCTGGGGGAATACCTTCCTTAT 244 Query 44028 CTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTG 44087 | ||| || || || | ||| |||||| | || ||||| || | || || | Sbjct 243 CCTGAATCTTGGCCTTTACATTCTCAATAGTATCAGAAGGTTCCACTTCCAAGGTGATGG 184 Query 44088 TTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 |||| || || || ||||| || || || ||||| Sbjct 183 TTTTTCCAGTCAAGGTCTTGACGAAAATCTGCAT 150 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 353980510855356