Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neobellieria_20bullata_20[genbank_20GCA_5F001017455.1_202015-06-01] 184,347 sequences; 396,224,597 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq55885 107 2e-18 seq7894 104 2e-17 seq175855 91.5 1e-13 seq47065 86.0 5e-12 >seq55885 Length=1496 Score = 107 bits (118), Expect = 2e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 19997 AACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCT 20056 ||||||||||| ||||||||||| || || || || || || || ||| |||| Sbjct 361 AACACCAAATGGAGTGTAGATTCCTTCTGAATATTATAGTCCGACAAAGTGCGGCCATCT 302 Query 20057 TCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCG 20116 ||||||||||| || || |||| | | ||||||||| ||| | ||||| || || Sbjct 301 TCCAATTGTTTACCGGCGAAAATTAAACGCTGTTGATCTGGGGGAATACCTTCCTTATCC 242 Query 20117 GCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTT 20176 ||| || || || | ||| || ||| ||||||| ||||| ||| |||||| Sbjct 241 TGAATCTTGGCCTTTACATTCTCAATAGTATCAGAAGGTTCCACTTCCAAGGTGATGGTT 182 Query 20177 TTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 || || ||||| || ||||| ||||| ||||| Sbjct 181 TTTCCAGTCAAGGTCTTGACGAAAATCTGCAT 150 >seq7894 Length=2644 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 || || || || | ||| |||||||| | ||||||||||||||| || |||||||| | Sbjct 2537 CCACCACGCAAACGCAATACCAAATGCAATGTAGATTCTTTTTGAATATTGTAATCAGAC 2478 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | || ||||||||||||||||| || | || | | |||||||| || Sbjct 2477 AATGTGCGCCCGTCTTCCAATTGTTTGCCAGCGAAGATTAAACGTTGTTGATCTGGAGGG 2418 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161 | ||||| ||||| |||||| ||| || | ||| || |||| ||| || Sbjct 2417 ATTCCTTCCTTGTCTTGAATTTTAGCTTTAACATTTTCAATAGTATCGGAAGGCTCAACC 2358 Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 || | || ||||||||||| |||| || |||||||| |||||||| Sbjct 2357 TCTAAAGTGATGGTTTTGCCAGTCAGTGTCTTGACAAAGATTTGCAT 2311 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/232 (69%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 20000 ACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTCC 20059 |||||||| ||||| ||||| ||||| || || |||||| || ||| |||||| Sbjct 2291 ACCAAATGAAGTGTTGATTCCTTTTGAATATTATAATCGGACAAAGTGCGTCCGTCTTCC 2232 Query 20060 AATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGCA 20119 ||||||||||| ||| |||| | | |||||||| ||| | || || || || | Sbjct 2231 AATTGTTTGCCGGCAAAAATTAAACGTTGTTGATCTGGGGGGATACCCTCCTTATCTTGA 2172 Query 20120 ATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTTG 20179 ||||| || || | ||| || ||| |||||| || | ||| ||||| ||| Sbjct 2171 ATTTTAGCCTTGACGTTCTCAATAGTATCAGAAGGTTCGACCTCTAAGGTGATGGTCTTG 2112 Query 20180 CCGGTCAACGTTTTGACAAAAATTTGCATTTTTAAACTCTTATAAATGACAA 20231 || || || || || || || || ||||||||| | | | ||||||||| Sbjct 2111 CCAGTTAAAGTCTTCACGAAGATCTGCATTTTTGAGTTTCTGAAAATGACAA 2060 >seq175855 Length=19510 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 20000 ACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTCC 20059 |||||||||| || ||||| ||||| |||||||| ||| || || | ||||||| Sbjct 16635 ACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCGGACAAGGTGCGACCATCTTCC 16576 Query 20060 AATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGCA 20119 ||||| || || || | || | | |||||||| ||| | ||||||||||| Sbjct 16575 AATTGCTTACCAGCGAAGATCAAACGTTGTTGATCTGGGGGGATACCTTCTTTGTCTTGG 16516 Query 20120 ATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTTG 20179 ||||| || || | ||| || ||| ||| || ||||| ||| |||||||| Sbjct 16515 ATTTTAGCCTTGACATTTTCAATAGTGTCGGAAGGCTCAACTTCCAAGGTGATGGTTTTA 16456 Query 20180 CCGGTCAACGTTTTGACAAAAATTTGCATTTTTAA 20214 || || | |||||||| || || ||||| | ||| Sbjct 16455 CCAGTTAGAGTTTTGACGAAGATCTGCATCTGTAA 16421 >seq47065 Length=7920 Score = 86.0 bits (94), Expect = 5e-12 Identities = 149/215 (69%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 19997 AACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGA--AT 20054 ||||| ||||| | || ||||| ||||| |||||||||||| |||| | | || Sbjct 2866 AACACTAAATGCAAAGTTGATTCCTTTTGGATGTTGTAATCGG--ATAGGGTACGTCCAT 2809 Query 20055 CTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGT 20114 ||||||||||||| || ||| |||| || | || ||||| || | || ||||||| Sbjct 2808 CTTCCAATTGTTTTCCAGCAAAAATTAGACGTTGCTGATCTGGTGGAATTCCCTCTTTGT 2749 Query 20115 CGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGG 20174 | ||| || ||| || | | | || ||| |||||| || | ||||||| Sbjct 2748 CCTGAATCTTGGCTTTGACATTTTCGATAGTATCAGAAGGTTCGACCTCAAGTGTAATGG 2689 Query 20175 TTTTGCCGGTCAACGTTTTGACAAAAATTTGCATT 20209 | ||||| || | || || |||||||| |||||| Sbjct 2688 TCTTGCCCGTTAGGGTCTTTACAAAAATCTGCATT 2654 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418644501243507