Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neobellieria_20bullata_20[genbank_20GCA_5F001017455.1_202015-06-01] 184,347 sequences; 396,224,597 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq74093 226 2e-54 >seq74093 Length=5834 Score = 226 bits (250), Expect = 2e-54 Identities = 491/724 (68%), Gaps = 12/724 (2%) Strand=Plus/Minus Query 12968 AATTCTAGTAACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATCACAGTTC 13027 ||||| | ||| || | ||||||||||| || || || | |||||| |||| ||| Sbjct 1841 AATTCCACTAATAAGCGATCAGCAACAAATTCAATATATTCGGACATTAATCCACAATTC 1782 Query 13028 ATTCCTATTAATTTTACAGGCATAGCTTCTGTTAAAAAGtttttttCTATATCAACTGCT 13087 || || ||||| | ||||||| || || ||||| || | || ||| || | ||| || Sbjct 1781 ATGCCAATTAAATCAACAGGCAGGGCATCAGTTAAGAACTCTTGTTCAATTTTAACAGCC 1722 Query 13088 TCGATAACTATGTCTCTTATTACGTTCTCTAATGGAGGATTTGATAGATGCTTAAACATC 13147 || || || || | || | || |||| | | | ||| || ||||| Sbjct 1721 TCTGAAATAATTTCAATAATCCTCTCCTTGCTTGGACGTTGCACCAAATGTTTGAACATT 1662 Query 13148 ATACA-TGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGT 13206 | ||| ||||||||||||||| || || ||||| | | || | || || || ||||| Sbjct 1661 A-ACACTGCAAAATCACAGTGTAAGCCCTCATCACGAGAGATCAATTCATTAGAGAATGT 1603 Query 13207 TAGACCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaa 13266 ||||| |||||||| || ||||| || | ||||||||||| ||| || || || Sbjct 1602 AAGACCGGGCATAAGACCACGTTTCTTCAACCAAAATATAGAAGCGAAACTTCCACTGAA 1543 Query 13267 aaaTATTCCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATACGTA-CT-ATTTTTA 13324 ||||| |||||||| || ||||| || || | | ||| ||| | | || ||||| | Sbjct 1542 GAATATACCTTCAACAGCAGCAAAAGCAATGATGCGTTCGCCAAAGTTTGCTGATTTTGA 1483 Query 13325 CTCTCTATCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTCATATTTTCTATT 13384 ||||| | ||||| | ||||| |||||||| ||| |||| | Sbjct 1482 GGAA--ATCCAGGCTAAAGCCCAATCAGCTTTACGTTTAACGGCCGGCATTGTTTCAACG 1425 Query 13385 GCGTTAAATAAATAAtttttttCCTTACTGTCTAAAATATAAGTATCTATCAATAAGCTA 13444 || ||||||| || | | || | | | ||| ||| || ||||| ||||| | ||| Sbjct 1424 GCATTAAATAGGTACTCTCGTTGGTCATTATCTGTAATGTAGGTATCAATCAAAATGCTG 1365 Query 13445 TACATTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCT 13504 |||||||| || |||| |||||||| |||||||| |||||||| ||||| | |||||| Sbjct 1364 TACATTTCAGAGTGAACGTTTTCCATGGCTATTTGAAAACCATAGAAACAACGAGCCTCA 1305 Query 13505 GATACCTGAACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTA 13564 | || |||||||| | | || | ||| | | ||||| || ||||| ||||| | Sbjct 1304 GTAACTTGAACTTCCTGGGAGAAGCGTTCAACCAGATTTTCATTGACTATACCGTCGGAA 1245 Query 13565 GCAGCaaaaaaaGC--AAGTATGTGCTTAATAAAttttttttCGTTTTCTGACAACTTTA 13622 ||||||||||| || || ||||| |||||| | ||| || || | || | || Sbjct 1244 GCAGCAAAAAAGGCCAAAACATGTGA--AATAAAATGACGTTCATTGTCGGT-AAGTCTA 1188 Query 13623 A-CCAATCTGGAAAATCTTTTGATAAATCTACCTCCTCAACGGTCCAAAAAGAAGCAACA 13681 |||||| | | ||| || | ||| || || || || ||||||||||| || || Sbjct 1187 TTCCAATCGGACATATCAGAAGAGAGATCCACTTCTTCTACAGTCCAAAAAGAGGCTTCA 1128 Query 13682 GCCT 13685 |||| Sbjct 1127 GCCT 1124 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430014099316494