Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neobellieria_20bullata_20[genbank_20GCA_5F001017455.1_202015-06-01] 184,347 sequences; 396,224,597 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq181649 129 7e-25 seq82204 127 2e-24 >seq181649 Length=1561 Score = 129 bits (142), Expect = 7e-25 Identities = 305/453 (67%), Gaps = 12/453 (3%) Strand=Plus/Minus Query 6808 AATTGTTCTTTTATAGCTTTTATATGATCTAAATAAATATGAGCATCTCCTAGCGTATGA 6867 ||||||||||| | || || || || | ||| | ||||| ||| || ||||| Sbjct 943 AATTGTTCTTTCAAAGGTTCAATGTGCGTTTTATAGACATGAGTATCGCCAGTAGTATGC 884 Query 6868 ATAAATTCACCTGGTTTCATATCAACAGCTTGAGCAATTAAATATGTTAATAATGCATAA 6927 | |||||| |||||||||| | | | || || || | || |||| | ||||| Sbjct 883 ACAAATTCTCCTGGTTTCAAACCGGTAATATGGGCTATCATGTAGGTTAGCAGAGCATAC 824 Query 6928 GAAGCTACATTAAAAGGTACACCTAATCCCATATCTGCTGATCTTTGATAACATTGACAA 6987 ||||| | |||||| || || || | |||||||| || | |||||| | ||||| Sbjct 823 GAAGCGATATTAAACGGCACTCCAAGACCCATATCCGCACTACGTTGATATAACTGACAG 764 Query 6988 GATA---AAATATTGTCTATAGCATAAAATTGACACAATACA-TGACATGGAGGTAAAAC 7043 |||| | ||| | | || ||||||| | | | ||| ||||| ||||| ||| | Sbjct 763 GATAGTTCACCATTAGCCA---CAAAAAATTG-CGCCAAACAGTGACAGGGAGGCAAAGC 708 Query 7044 AGCCTGATCTATATCAGATGGATTCCAAGCAGTCATTAAAATACGTCTATCATTTGGATT 7103 || ||||||| |||||||| |||| ||||| ||| |||| ||||| || || Sbjct 707 CATTTGGGGTATATCAACGGGATTCCAGGCAGACATTATAATGCGTCGGTCATTAGGGTT 648 Query 7104 --TGTTTTTAATTTTGTTATAATTATTTGTAATTGATCTATACCCTGACCTTCATAATTA 7161 || | | | ||| | || | ||| | |||||| | |||| | || | | Sbjct 647 GGTGCGTATGGTATTGAT-TACCTCTTT-CAGTTGATCAACTCCCTCATTGGTGTAGTCA 590 Query 7162 GTATGACAATTTATATAATTAGCTCCAAAATGTCTCCATTGAAACCCATAAATAGGACCT 7221 |||||| | ||| || || |||||||| | ||||||||| ||||||| ||||| Sbjct 589 TCGTGACAAGTGCGATACTTGGCGCCAAAATGACGCCATTGAAAACCATAAACTGGACCC 530 Query 7222 AAATCACCTTCTTCACGATGATTAAATCCTAAT 7254 ||||| ||||||||||||| | || |||||| Sbjct 529 AAATCGCCTTCTTCACGATCGGTGAAACCTAAT 497 >seq82204 Length=9092 Score = 127 bits (140), Expect = 2e-24 Identities = 213/305 (70%), Gaps = 6/305 (2%) Strand=Plus/Plus Query 164393 ATTGGAATTTTGAAGAAATGGGAGTAGGTGGACTAGATCGAGAATTTTCTCTTATTTTCA 164452 ||||| |||| | ||||||| | ||||| | ||| ||| || | ||||| | Sbjct 3942 ATTGGGATTTCGGTAAAATGGGTATTGGTGGCTTGGATAAAGAGTTCAATGCCATTTTTA 4001 Query 164453 GACGAGCATTTGCTTCTAGATCAGTTCCTATCGAAATAATaaaaaaaTTAGGCTGTAAAC 164512 | |||| ||||||||| || ||||| || | | || ||||||| ||||||| Sbjct 4002 GGAGAGCTTTTGCTTCTCGAGTCTTTCCTCCAGAGTTGGTGGAACAATTAGGTTGTAAAC 4061 Query 164513 ATATAAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATTAATGGCTCGAT 164572 | | ||||| || ||||| | || || |||||| |||||||| || ||||| ||| Sbjct 4062 ACGTTAAAGGTATATTATTGTACGGTCCACCTGGTACTGGTAAAACTTTGATGGCACGAC 4121 Query 164573 GCATTGCTCAAGCTTTTAAAT---CGCGACCCGTTAAAATTGTTAATGGTCCTGAATTAT 164629 || | ||| | |||||| || || || ||||||||||||||| ||| || | | Sbjct 4122 AAATCGG-CAATATGTTAAATGCTCGGGAACC--TAAAATTGTTAATGGCCCTCAAATCT 4178 Query 164630 TGAACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTCAGGAGGCTGAAG 164689 || | || || || ||||| |||||||| ||| | ||| |||||| || ||||||| Sbjct 4179 TGGATAAGTACGTGGGTGAATCAGAAGCCAATATAAGACGTTTGTTTGCCGAAGCTGAAG 4238 Query 164690 AAGAA 164694 ||||| Sbjct 4239 AAGAA 4243 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 594498909805200