Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neobellieria_20bullata_20[genbank_20GCA_5F001017455.1_202015-06-01] 184,347 sequences; 396,224,597 total letters Query= NC_005905.1 Length=86462 Score E Sequences producing significant alignments: (Bits) Value seq161574 100 2e-16 seq174962 84.2 1e-11 >seq161574 Length=5533 Score = 100 bits (110), Expect = 2e-16 Identities = 139/195 (71%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 3875 GGTGTACATTTTATGATGGCTGACGGTGGGTTCTCGGTTGAGGGTCAAGAAAATATGCAA 3934 || || |||||| | ||||| || || || || || ||||| || ||||||||||| ||| Sbjct 3604 GGCGTTCATTTTGTTATGGCCGATGGAGGATTTTCTGTTGAAGGCCAAGAAAATATTCAA 3545 Query 3935 GAAATGTTATCGAAAAAGATGTATTTGTGTCAATGTTTAATTGCATTGATGATCATACGA 3994 || || ||||| ||| || | ||||| ||||||||| | | || | | || | ||| Sbjct 3544 GAGATATTATCAAAACAGCTATATTTATGTCAATGTCTTACAGCCCTTAAAATTCTGCGA 3485 Query 3995 ATTGGTGGTCATTGTGTTATCAAATTTTTCGATATATTTACACCTTTTAGTGCTGGTTTA 4054 | | ||| || | || ||||| || ||| | |||||||||||||||| || || Sbjct 3484 AATAATGGAAGTTTTCTTTGTAAATTATTTGATGTTTTTACACCTTTTAGTGTAGGCCTA 3425 Query 4055 GTGTATTTGATGTAT 4069 | || | |||||| Sbjct 3424 ATATACCTAATGTAT 3410 >seq174962 Length=5126 Score = 84.2 bits (92), Expect = 1e-11 Identities = 73/91 (80%), Gaps = 0/91 (0%) Strand=Plus/Minus Query 5947 GGTGGTAAAGACGCATGCCAAGGTGATTCGGGTGGCCCGTTAGTTGTCGATAACCGCTTA 6006 || |||||||| ||||||||||||||| | |||||||| ||||| | ||||| | || Sbjct 1080 GGCGGTAAAGATGCATGCCAAGGTGATACTGGTGGCCCCTTAGTCATAGATAATCAATTG 1021 Query 6007 GCTGGTATCGTGTCATGGGGTAATGGATGTG 6037 | |||| | || ||||||||| |||||||| Sbjct 1020 GTTGGTTTAGTATCATGGGGTCGTGGATGTG 990 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 275932258989541