Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neobellieria_20bullata_20[genbank_20GCA_5F001017455.1_202015-06-01] 184,347 sequences; 396,224,597 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq60851 131 9e-26 seq10353 123 1e-23 seq129462 122 5e-23 seq35648 122 5e-23 seq14448 120 2e-22 seq145219 113 2e-20 seq134315 113 2e-20 seq108988 113 2e-20 seq48284 113 2e-20 seq124358 109 3e-19 seq88378 105 3e-18 >seq60851 Length=14344 Score = 131 bits (144), Expect = 9e-26 Identities = 80/86 (93%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 |||| ||||||||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct 4940 AAAATATCAAATTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGAC 4999 Query 11504 GCTCTRACCAACTGAGCTAATGGGCC 11529 ||||| |||||||||||||||||||| Sbjct 5000 GCTCTAACCAACTGAGCTAATGGGCC 5025 >seq10353 Length=1938 Score = 123 bits (136), Expect = 1e-23 Identities = 81/90 (90%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 11440 TAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCA 11499 |||||| || ||| ||||||||||| |||||||||| |||||||||||||||||||| Sbjct 1743 TAATAATAAGTCATGTTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCA 1802 Query 11500 CGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||||| |||||||||||||||||||| Sbjct 1803 CGACGCTCTAACCAACTGAGCTAATGGGCC 1832 Score = 114 bits (126), Expect = 7e-21 Identities = 83/94 (88%), Gaps = 2/94 (2%) Strand=Plus/Plus Query 11438 ATTAATAAAAAAT-CAAAT-TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATT 11495 ||||| || ||| ||| | |||||||||| |||||||||| |||||||||||||||| Sbjct 406 ATTAAAAAGTAATGCAAGTATGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATT 465 Query 11496 AGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||||||||| |||||||||||||||||||| Sbjct 466 AGCACGACGCTCTAACCAACTGAGCTAATGGGCC 499 >seq129462 Length=2187 Score = 122 bits (134), Expect = 5e-23 Identities = 78/86 (91%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 |||||| ||| |||||||||| |||||||||| |||||||||||||||||||||||| Sbjct 2004 AAAAAAAAAAACTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGAC 1945 Query 11504 GCTCTRACCAACTGAGCTAATGGGCC 11529 ||||| |||||||||||||||||||| Sbjct 1944 GCTCTAACCAACTGAGCTAATGGGCC 1919 Score = 113 bits (124), Expect = 2e-20 Identities = 69/74 (93%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 397 TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 338 Query 11516 TGAGCTAATGGGCC 11529 |||||||||||||| Sbjct 337 TGAGCTAATGGGCC 324 >seq35648 Length=1847 Score = 122 bits (134), Expect = 5e-23 Identities = 80/89 (90%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 |||||| ||| |||||||||| |||||||||| |||||||||||||||||||||||| Sbjct 311 AAAAAAAAAAACTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGAC 370 Query 11504 GCTCTRACCAACTGAGCTAATGGGCCGTC 11532 ||||| |||||||||||||||||||| || Sbjct 371 GCTCTAACCAACTGAGCTAATGGGCCATC 399 Score = 122 bits (134), Expect = 5e-23 Identities = 78/86 (91%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 |||||| ||| |||||||||| |||||||||| |||||||||||||||||||||||| Sbjct 856 AAAAAAAAAAACTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGAC 915 Query 11504 GCTCTRACCAACTGAGCTAATGGGCC 11529 ||||| |||||||||||||||||||| Sbjct 916 GCTCTAACCAACTGAGCTAATGGGCC 941 >seq14448 Length=3282 Score = 120 bits (132), Expect = 2e-22 Identities = 80/89 (90%), Gaps = 3/89 (3%) Strand=Plus/Minus Query 11444 AAAAAATCAAAT---TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 ||||||| |||| |||||||||| |||||||||| ||||||||||||||||||||| Sbjct 1809 AAAAAATAAAATGTATGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCAC 1750 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||| |||||||||||||||||||| Sbjct 1749 GACGCTCTAACCAACTGAGCTAATGGGCC 1721 Score = 114 bits (126), Expect = 7e-21 Identities = 73/79 (92%), Gaps = 1/79 (1%) Strand=Plus/Plus Query 11452 AAAT-TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRA 11510 |||| |||||||||| |||||||||| ||||||||||||||||||||||||||||| | Sbjct 1044 AAATATGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAA 1103 Query 11511 CCAACTGAGCTAATGGGCC 11529 ||||||||||||||||||| Sbjct 1104 CCAACTGAGCTAATGGGCC 1122 Score = 113 bits (124), Expect = 2e-20 Identities = 69/74 (93%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 204 TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 145 Query 11516 TGAGCTAATGGGCC 11529 |||||||||||||| Sbjct 144 TGAGCTAATGGGCC 131 Score = 113 bits (124), Expect = 2e-20 Identities = 69/74 (93%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 2442 TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 2383 Query 11516 TGAGCTAATGGGCC 11529 |||||||||||||| Sbjct 2382 TGAGCTAATGGGCC 2369 >seq145219 Length=1661 Score = 113 bits (124), Expect = 2e-20 Identities = 69/74 (93%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 1209 TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 1150 Query 11516 TGAGCTAATGGGCC 11529 |||||||||||||| Sbjct 1149 TGAGCTAATGGGCC 1136 >seq134315 Length=1384 Score = 113 bits (124), Expect = 2e-20 Identities = 69/74 (93%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 1159 TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 1218 Query 11516 TGAGCTAATGGGCC 11529 |||||||||||||| Sbjct 1219 TGAGCTAATGGGCC 1232 >seq108988 Length=2161 Score = 113 bits (124), Expect = 2e-20 Identities = 69/74 (93%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 542 TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 483 Query 11516 TGAGCTAATGGGCC 11529 |||||||||||||| Sbjct 482 TGAGCTAATGGGCC 469 >seq48284 Length=1891 Score = 113 bits (124), Expect = 2e-20 Identities = 85/101 (84%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 11429 AAATATAGAATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCG 11488 ||| | | || ||| ||||| | |||||||||| |||||||||| ||||||||| Sbjct 73 AAAAAAAAAAATAAAAAAAATTATTTTTGGCCCATGGGGGGATCGAACCCGCGACCTTCG 132 Query 11489 CGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||||||||||||||| |||||||||||||||||||| Sbjct 133 CGTTATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCC 173 Score = 105 bits (116), Expect = 3e-18 Identities = 81/97 (84%), Gaps = 5/97 (5%) Strand=Plus/Plus Query 11438 ATTAATAAAAAATCAAAT-----TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTT 11492 || ||||||||| || | ||||||||| |||||||||| || |||||||||| Sbjct 934 ATAAATAAAAAAACACTTGAAGCTGGCCCATGGGGGGATCGAACCCGCGGCCTTCGCGTT 993 Query 11493 ATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||||||||||| |||||||||||||||||||| Sbjct 994 ATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCC 1030 >seq124358 Length=1230 Score = 109 bits (120), Expect = 3e-19 Identities = 68/74 (92%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 ||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 1128 TGGCCCATGGGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 1069 Query 11516 TGAGCTAATGGGCC 11529 |||||||||||||| Sbjct 1068 TGAGCTAATGGGCC 1055 >seq88378 Length=1401 Score = 105 bits (116), Expect = 3e-18 Identities = 85/103 (83%), Gaps = 4/103 (4%) Strand=Plus/Plus Query 11431 ATATAGAATTAATAAAAAA----TCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTT 11486 || || || ||| |||||| | || ||||||||| |||||||||| || |||| Sbjct 527 ATGTATAAATAAAAAAAAACACTTGAAGCTGGCCCATGGGGGGATCGAACCCGCGGCCTT 586 Query 11487 CGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||||||||||||||||| |||||||||||||||||||| Sbjct 587 CGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCC 629 Lambda K H 0.638 0.410 0.920 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 260903700121372