Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neobellieria_20bullata_20[genbank_20GCA_5F001017455.1_202015-06-01] 184,347 sequences; 396,224,597 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq47065 134 1e-26 seq175855 129 5e-25 seq7894 129 5e-25 seq55885 114 1e-20 >seq47065 Length=7920 Score = 134 bits (148), Expect = 1e-26 Identities = 161/217 (74%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA- 94851 || ||||| || |||||||| ||||||||||| | ||| |||||| |||| || | Sbjct 2869 CGTAACACTAAATGCAAAGTTGATTCCTTTTGGATGTTGTAATCGG--ATAGGGTACGTC 2812 Query 94852 -ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTT 94910 ||| |||| |||||||| |||| |||| | |||||||||||| ||||| || |||| Sbjct 2811 CATCTTCCAATTGTTTTCCAGCAAAAATTAGACGTTGCTGATCTGGTGGAATTCCCTCTT 2752 Query 94911 TGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGA 94970 |||| | ||| || || ||||| ||| ||| |||| | ||||| |||| || | Sbjct 2751 TGTCCTGAATCTTGGCTTTGACATTTTCGATAGTATCAGAAGGTTCGACCTCAAGTGTAA 2692 Query 94971 TGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 |||| || || || || || || ||||| |||||||| Sbjct 2691 TGGTCTTGCCCGTTAGGGTCTTTACAAAAATCTGCAT 2655 >seq175855 Length=19510 Score = 129 bits (142), Expect = 5e-25 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 ||||| || ||||| ||||||||||| | ||| || ||| || ||| ||| ||| Sbjct 16635 ACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCGGACAAGGTGCGACCATCTTCC 16576 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 | || || || | ||||| || | ||| |||||||| || |||||||||||||| | Sbjct 16575 AATTGCTTACCAGCGAAGATCAAACGTTGTTGATCTGGGGGGATACCTTCTTTGTCTTGG 16516 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978 ||||| |||||||| | | |||||| | | || || || | ||||||||||| Sbjct 16515 ATTTTAGCCTTGACATTTTCAATAGTGTCGGAAGGCTCAACTTCCAAGGTGATGGTTTTA 16456 Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||| |||||||| || ||||||||||| Sbjct 16455 CCAGTTAGAGTTTTGACGAAGATCTGCAT 16427 >seq7894 Length=2644 Score = 129 bits (142), Expect = 5e-25 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 ||||| || | || ||||||||||| | ||||||||| || |||| || ||| Sbjct 2291 ACCAAATGAAGTGTTGATTCCTTTTGAATATTATAATCGGACAAAGTGCGTCCGTCTTCC 2232 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 | ||||| ||| |||| ||||| | ||| |||||||| || ||||| || || || | | Sbjct 2231 AATTGTTTGCCGGCAAAAATTAAACGTTGTTGATCTGGGGGGATACCCTCCTTATCTTGA 2172 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978 ||||| ||||||||| | | ||| |||| | ||||| || | |||||||| || Sbjct 2171 ATTTTAGCCTTGACGTTCTCAATAGTATCAGAAGGTTCGACCTCTAAGGTGATGGTCTTG 2112 Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||| | ||| ||||| ||||||||||| Sbjct 2111 CCAGTTAAAGTCTTCACGAAGATCTGCAT 2083 Score = 123 bits (136), Expect = 2e-23 Identities = 178/249 (71%), Gaps = 3/249 (1%) Strand=Plus/Minus Query 94764 TTTTAA--AAT-TTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCT 94820 |||||| ||| ||| || || || | ||| ||||| ||||| ||||| |||||||| | Sbjct 2557 TTTTAACAAATATTTGCATGCCACCACGCAAACGCAATACCAAATGCAATGTAGATTCTT 2498 Query 94821 TTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTA 94880 |||| | || ||||| || ||| || |||| ||||| || | ||||||| Sbjct 2497 TTTGAATATTGTAATCAGACAATGTGCGCCCGTCTTCCAATTGTTTGCCAGCGAAGATTA 2438 Query 94881 ATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGA 94940 | | ||| ||||||||||| || ||||| ||||| | |||||| || || || | | Sbjct 2437 AACGTTGTTGATCTGGAGGGATTCCTTCCTTGTCTTGAATTTTAGCTTTAACATTTTCAA 2378 Query 94941 CAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGA 95000 ||| || | | || || || | ||||||||||| ||||| || || || ||||||| Sbjct 2377 TAGTATCGGAAGGCTCAACCTCTAAAGTGATGGTTTTGCCAGTCAGTGTCTTGACAAAGA 2318 Query 95001 TCTGCATGC 95009 | ||||||| Sbjct 2317 TTTGCATGC 2309 >seq55885 Length=1496 Score = 114 bits (126), Expect = 1e-20 Identities = 171/242 (71%), Gaps = 2/242 (1%) Strand=Plus/Minus Query 94768 AAAATTT--TACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGC 94825 ||||||| || | ||||| | | || |||||||| || | ||||||||||| || Sbjct 391 AAAATTTAGTAGGCGCCTCCGCGAAGACGTAACACCAAATGGAGTGTAGATTCCTTCTGA 332 Query 94826 ACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTT 94885 | ||||| || || |||| | ||| |||| ||||| ||| | || ||||| | Sbjct 331 ATATTATAGTCCGACAAAGTGCGGCCATCTTCCAATTGTTTACCGGCGAAAATTAAACGC 272 Query 94886 TGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTG 94945 || |||||||| ||||||||||| || || | ||| || ||||| || | | ||| Sbjct 271 TGTTGATCTGGGGGAATACCTTCCTTATCCTGAATCTTGGCCTTTACATTCTCAATAGTA 212 Query 94946 TCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGC 95005 |||| | || || || | ||||||||||||||||| | || || || || |||||| Sbjct 211 TCAGAAGGTTCCACTTCCAAGGTGATGGTTTTTCCAGTCAAGGTCTTGACGAAAATCTGC 152 Query 95006 AT 95007 || Sbjct 151 AT 150 Score = 84.2 bits (92), Expect = 2e-11 Identities = 100/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852 ||||| |||||||| | || ||||||||||| | || || ||| || ||| Sbjct 136 CGCAATACCAAGTGAAGGGTGGATTCCTTTTGGATATTGTAGTCGGACAAAGTACGACCG 77 Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 ||||||| |||||| ||| | ||||| | | ||| |||||||| ||||||||||| ||| Sbjct 76 TCCTCCAACTGTTTACCGGCGAAGATGAGACGTTGTTGATCTGGGGGAATACCTTCCTTG 17 Query 94913 TCATAAATTTTTGCCT 94928 || | || || |||| Sbjct 16 TCTTGGATCTTAGCCT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447258185776920