Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neobellieria_20bullata_20[genbank_20GCA_5F001017455.1_202015-06-01] 184,347 sequences; 396,224,597 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq74093 181 1e-40 >seq74093 Length=5834 Score = 181 bits (200), Expect = 1e-40 Identities = 458/699 (66%), Gaps = 6/699 (1%) Strand=Plus/Minus Query 21301 TAATAATCTATCTGCTACAAATTCTATATATTGACACATTAATTCACAATTCATACCGAT 21360 |||||| | ||| || |||||||| ||||||| |||||||| |||||||||| || || Sbjct 1833 TAATAAGCGATCAGCAACAAATTCAATATATTCGGACATTAATCCACAATTCATGCCAAT 1774 Query 21361 CAATTTTACAGGAAGAGCTTTTGTCAAAAAAGATTTTTCTATAGAGACGGCTTCAACAAT 21420 || | ||||| || || | || || || || ||| || || || || ||| Sbjct 1773 TAAATCAACAGGCAGGGCATCAGTTAAGAACTCTTGTTCAATTTTAACAGCCTCTGAAAT 1714 Query 21421 TATATTTATTATCCTAGATGTACTAGGGGGATACAATAATTGTTTAAACATCAAACATGC 21480 || | || ||||| | || || | | || || ||||| ||||| || ||| Sbjct 1713 AATTTCAATAATCCTCTCCTTGCTTGGACGTTGCACCAAATGTTTGAACATTAACACTGC 1654 Query 21481 AAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCGGG 21540 ||||||||| || || || ||||| | | || ||||||||||| ||||| | |||||| Sbjct 1653 AAAATCACAGTGTAAGCCCTCATCACGAGAGATCAATTCATTAGAGAATGTAAGACCGGG 1594 Query 21541 CATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAAGAAAATGCC 21600 ||| | || | || || ||||||||||| || || || ||| ||||| || || Sbjct 1593 CATAAGACCACGTTTCTTCAACCAAAATATAGAAGCGAAACTTCCACTGAAGAATATACC 1534 Query 21601 CTCAACGGCAGCAAATGCAACTAATCGTTCACC---GTATGTAGATTCTTTATCCAATAT 21657 ||||| |||||||| |||| | ||||| || || || |||| || | | || Sbjct 1533 TTCAACAGCAGCAAAAGCAATGATGCGTTCGCCAAAGTTTGCTGATT-TTGA--GGAAAT 1477 Query 21658 CCATTTTTCTGCCCATTTTGCCTTTTCTTTAATACAATCAATTGTATCAATAGCTTTTAA 21717 ||| | ||||| | || || ||||| ||||| |||| || || || Sbjct 1476 CCAGGCTAAAGCCCAATCAGCTTTACGTTTAACGGCCGGCATTGTTTCAACGGCATTAAA 1417 Query 21718 AAGATGAtttttttCATCTACATCGGTTATGNNNNNNNNNNNNNNNNNACTATACATTTC 21777 || | | | || || ||| || ||| || |||||||| Sbjct 1416 TAGGTACTCTCGTTGGTCATTATCTGTAATGTAGGTATCAATCAAAATGCTGTACATTTC 1357 Query 21778 AGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTGCCTCTGAACATTG 21837 ||| || | ||||| || ||||| ||||| || || ||||| | ||||| | | ||| Sbjct 1356 AGAGTGAACGTTTTCCATGGCTATTTGAAAACCATAGAAACAACGAGCCTCAGTAACTTG 1297 Query 21838 AACCTCGGAATAAAATCGTTGAGCCAAGTTTTCATTTACTATTCCATCACTGGCGGCAAA 21897 ||| || | || |||| | ||| |||||||| ||||| || || || ||||| Sbjct 1296 AACTTCCTGGGAGAAGCGTTCAACCAGATTTTCATTGACTATACCGTCGGAAGCAGCAAA 1237 Query 21898 AAATGCCAATATATTTTTTATAAAATATCGTTCGTTATCTGTTAATTTTTTCCAATCTAA 21957 ||| ||||| | || | ||||||| ||||| || || || | | | |||||||| | Sbjct 1236 AAAGGCCAAAACATGTGAAATAAAATGACGTTCATTGTCGGTAAGTCTATTCCAATCGGA 1177 Query 21958 TAAATCTTTTGATAAATCTACTTCTTCAGTTGTCCAAAA 21996 | ||| || | ||| |||||||| |||||||| Sbjct 1176 CATATCAGAAGAGAGATCCACTTCTTCTACAGTCCAAAA 1138 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 530675121040280