Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neobellieria_20bullata_20[genbank_20GCA_5F001017455.1_202015-06-01] 184,347 sequences; 396,224,597 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq74093 291 1e-73 >seq74093 Length=5834 Score = 291 bits (322), Expect = 1e-73 Identities = 500/721 (69%), Gaps = 5/721 (1%) Strand=Plus/Minus Query 33119 CCAATTC-AGAAATCAATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAA 33177 ||||||| | ||| || | ||| || || ||||| |||||| ||| | | ||||| Sbjct 1843 CCAATTCCACTAAT-AAGCGATCAGCAACAAATTCAATATATTCGGACATTAATCCACAA 1785 Query 33178 TTCATTCCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACC 33237 ||||| || || | | ||| || || || |||| | || ||||||||||| || Sbjct 1784 TTCATGCCAATTAAATCAACAGGCAGGGCATCAGTTAAGAACTCTTGTTCAATTTTAACA 1725 Query 33238 GCATCTGTTATAATAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAAC 33297 || |||| ||||| ||| | || | || || | |||| |||||||| ||| Sbjct 1724 GCCTCTGAAATAATTTCAATAATCCTCTCCTTGCTTGGACGTTGCACCAAATGTTTGAAC 1665 Query 33298 ATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAAC 33357 || || ||| ||||| ||||| | ||||| || | | || | ||| || || || Sbjct 1664 ATTAACACTGCAAAATCACAGTGTAAGCCCTCATCACGAGAGATCAATTCATTAGAGAAT 1605 Query 33358 GTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAA 33417 || || |||||||| || ||||| || || | ||||||||| |||||||| |||| Sbjct 1604 GTAAGACCGGGCATAAGACCACGTTTCTTCAACCAAAATATAGAAGCGAAACTTCCACTG 1545 Query 33418 AAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGC-GCTGTC 33476 ||||| || ||||| || |||||||| ||||| | | || ||| | || | | | Sbjct 1544 AAGAATATACCTTCAACAGCAGCAAAAGCAATGATGCGTTCGCCAAAGTTTGCTGATTTT 1485 Query 33477 ATG--TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATG 33534 | ||||| | ||||||||| || || ||| || ||||| ||||| | | Sbjct 1484 GAGGAAATCCAGGCTAAAGCCCAATCAGCTTTACGTTTAACGGCCGGCATTGTTTCAACG 1425 Query 33535 GCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTA 33594 |||||||| || || | | || | | ||||| ||| || ||||| ||||||| || Sbjct 1424 GCATTAAATAGGTACTCTCGTTGGTCATTATCTGTAATGTAGGTATCAATCAAAATGCTG 1365 Query 33595 TACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCG 33654 |||||||| || |||| |||||| ||||| || ||||| || |||||||| | |||||| Sbjct 1364 TACATTTCAGAGTGAACGTTTTCCATGGCTATTTGAAAACCATAGAAACAACGAGCCTCA 1305 Query 33655 GTAATCTGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTG 33714 |||| || ||||| | || ||||| ||| ||||||||| ||||| ||||| Sbjct 1304 GTAACTTGAACTTCCTGGGAGAAGCGTTCAACCAGATTTTCATTGACTATACCGTCGGAA 1245 Query 33715 GCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTC 33774 || |||||||| ||||| |||||| ||||||| ||| | || ||| ||||| Sbjct 1244 GCAGCAAAAAAGGCCAAAACATGTGAAATAAAATGACGTTCATTGTCGGTAAGTCTATTC 1185 Query 33775 CAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCC 33834 ||||| ||||| ||| | ||| |||||||| || |||||||| || || || ||| Sbjct 1184 CAATCGGACATATCAGAAGAGAGATCCACTTCTTCTACAGTCCAAAAAGAGGCTTCAGCC 1125 Query 33835 T 33835 | Sbjct 1124 T 1124 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 621511719406520