Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neobellieria_20bullata_20[genbank_20GCA_5F001017455.1_202015-06-01] 184,347 sequences; 396,224,597 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq175855 143 3e-29 seq7894 129 6e-25 seq47065 98.7 9e-16 >seq175855 Length=19510 Score = 143 bits (158), Expect = 3e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || ||||||| || || |||||||| |||||||| ||| | Sbjct 16653 CCACCACGAAGACGGAGAACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCGGAC 16594 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| || || | ||||| || ||| |||| ||||| || || || || ||| Sbjct 16593 AAGGTGCGACCATCTTCCAATTGCTTACCAGCGAAGATCAAACGTTGTTGATCTGGGGGG 16534 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||||||||| |||||| ||||| | || | ||| |||| | ||| | Sbjct 16533 ATACCTTCTTTGTCTTGGATTTTAGCCTTGACATTTTCAATAGTGTCGGAAGGCTCAACT 16474 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | ||||||||| ||||||||||| ||||| |||||||| Sbjct 16473 TCCAAGGTGATGGTTTTACCAGTTAGAGTTTTGACGAAGATCTGCAT 16427 >seq7894 Length=2644 Score = 129 bits (142), Expect = 6e-25 Identities = 168/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| |||||||||| || ||||| | || || || |||||||| |||||||| Sbjct 2538 GCCACCACGCAAACGCAATACCAAATGCAATGTAGATTCTTTTTGAATATTGTAATCAGA 2479 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || |||||| ||| || | || ||||| ||| |||||||||| || || || ||||| Sbjct 2478 CAATGTGCGCCCGTCTTCCAATTGTTTGCCAGCGAAGATTAAACGTTGTTGATCTGGAGG 2419 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGC-TGCTCCACAGTATCGGTGGACTCGA 131185 ||||||||| ||||| ||| ||| |||| | | | || | |||||||| | ||| | Sbjct 2418 GATTCCTTCCTTGTC-TTGAATTTTAGCTTTAACATTTTCAATAGTATCGGAAGGCTCAA 2360 Query 131186 TGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | || | |||||| || || || || || || || || |||||| Sbjct 2359 CCTCTAAAGTGATGGTTTTGCCAGTCAGTGTCTTGACAAAGATTTGCATG 2310 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| || | ||| || || ||||| | || || ||||||||||| || |||||| Sbjct 2310 GCCACCACGAAGACGTAGAACCAAATGAAGTGTTGATTCCTTTTGAATATTATAATCGGA 2251 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || ||||| ||| || | || ||||| || | |||||||| || || || || || Sbjct 2250 CAAAGTGCGTCCGTCTTCCAATTGTTTGCCGGCAAAAATTAAACGTTGTTGATCTGGGGG 2191 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| || || || || ||||| ||||| | ||| | |||||| | | |||| Sbjct 2190 GATACCCTCCTTATCTTGAATTTTAGCCTTGACGTTCTCAATAGTATCAGAAGGTTCGAC 2131 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | ||| || || |||| ||| || ||||| |||||||| Sbjct 2130 CTCTAAGGTGATGGTCTTGCCAGTTAAAGTCTTCACGAAGATCTGCAT 2083 >seq47065 Length=7920 Score = 98.7 bits (108), Expect = 9e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | || | ||||||||| | || || |||||||| |||||||||||| Sbjct 2881 CCACCACGGAGGCGTAACACTAAATGCAAAGTTGATTCCTTTTGGATGTTGTAATCGGAT 2822 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || || || | || || || || | |||| ||| ||||| || || || Sbjct 2821 AGGGTACGTCCATCTTCCAATTGTTTTCCAGCAAAAATTAGACGTTGCTGATCTGGTGGA 2762 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTT-GAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||||| |||||||| ||| | | |||| || | || | |||||| | | |||| Sbjct 2761 ATTCCCTCTTTGTCC-TGAATCTTGGCTTTGACATTTTCGATAGTATCAGAAGGTTCGAC 2703 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | |||| ||| || || ||||| || ||||| ||||||||||| Sbjct 2702 CTCAAGTGTAATGGTCTTGCCCGTTAGGGTCTTTACAAAAATCTGCAT 2655 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 470925123204480