Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neobellieria_20bullata_20[genbank_20GCA_5F001017455.1_202015-06-01] 184,347 sequences; 396,224,597 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq7894 136 3e-27 seq47065 127 2e-24 seq175855 125 6e-24 >seq7894 Length=2644 Score = 136 bits (150), Expect = 3e-27 Identities = 166/224 (74%), Gaps = 2/224 (1%) Strand=Plus/Plus Query 24989 AAACGGAACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGT 25048 |||| || |||||| || || || |||||||| || || || ||||||| | || || Sbjct 2073 AAACTCAAAAATGCAGATCTTCGTGAAGACTTTAACTGGCAAGACCATCACCTTAGAGGT 2132 Query 25049 GGAGTCGTCTGACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTC 25107 || | ||||| ||||| ||| | ||| | |||| ||| || || || || || | Sbjct 2133 CGAACCTTCTGATACTATTGAGAACGTCAAGGCTAAAATTCAA-GATAAGGAGGGTATCC 2191 Query 25108 CACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGG 25167 | || || ||||| || | |||||||||||||||||||| ||||| | |||||| || Sbjct 2192 CCCCAGATCAACAACGTTTAATTTTTGCCGGCAAACAATTGGAAGACGGACGCACTTTGT 2251 Query 25168 GCGATTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTA 25211 |||||| ||||||||||| ||||| || || ||||| || ||| Sbjct 2252 CCGATTATAATATTCAAAAGGAATCAACACTTCATTTGGTTCTA 2295 Score = 127 bits (140), Expect = 2e-24 Identities = 157/212 (74%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| ||||| |||| || ||| ||||||| | || || ||| | || Sbjct 2311 ATGCAAATCTTTGTCAAGACACTGACTGGCAAAACCATCACTTTAGAGGTTGAGCCTTCC 2370 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 || ||||| || | || |||| |||| ||| ||||| ||||| || || || || Sbjct 2371 GATACTATTGAA--AATGTTAAAGCTAAAATTCAA-GACAAGGAAGGAATCCCTCCAGAT 2427 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 ||||| || | || || || ||||||||||| ||||| | ||||| || |||||| Sbjct 2428 CAACAACGTTTAATCTTCGCTGGCAAACAATTGGAAGACGGGCGCACATTGTCTGATTAC 2487 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGT 25207 ||||||||||||||||| || | ||||| || Sbjct 2488 AATATTCAAAAAGAATCTACATTGCATTTGGT 2519 >seq47065 Length=7920 Score = 127 bits (140), Expect = 2e-24 Identities = 161/219 (74%), Gaps = 8/219 (4%) Strand=Plus/Plus Query 24997 CAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGT 25056 ||||||| || ||||||||||| | || || || |||| ||| | || || || | | Sbjct 2653 CAATGCAGATTTTTGTAAAGACCCTAACGGGCAAGACCATTACACTTGAGGTCGAACCTT 2712 Query 25057 CTGACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCT 25112 |||| |||||||| |||| |||| || | ||| |||||||| || |||||||| Sbjct 2713 CTGATACTATCGAAAATGTCA---AAGCCAAGATTCA-GGACAAAGAGGGAATTCCACCA 2768 Query 25113 GACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGAT 25172 || || || || | |||||||| || |||||||| ||||||| || || | |||| Sbjct 2769 GATCAGCAACGTCTAATTTTTGCTGGAAAACAATTGGAAGATGGACGTACCCTATCCGAT 2828 Query 25173 TACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTA 25211 ||||| || ||||| ||||| || | ||||||||| || Sbjct 2829 TACAACATCCAAAAGGAATCAACTTTGCATTTAGTGTTA 2867 >seq175855 Length=19510 Score = 125 bits (138), Expect = 6e-24 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || || ||| | || |||||| ||||||| | ||||| ||| | || Sbjct 16427 ATGCAGATCTTCGTCAAAACTCTAACTGGTAAAACCATCACCTTGGAAGTTGAGCCTTCC 16486 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 |||||||| || | ||| |||||| ||||||||||| || || || || ||| Sbjct 16487 GACACTATTGAAAATGTCAAGGCTAAAATCCAAGACAAAGAAGGTATCCCCCCAGATCAA 16546 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 || || | || || || || || ||||| ||||||| |||||| || ||| ||||| Sbjct 16547 CAACGTTTGATCTTCGCTGGTAAGCAATTGGAAGATGGTCGCACCTTGTCCGACTACAAC 16606 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || ||||| |||||||| ||||||| || || Sbjct 16607 ATCCAAAAGGAATCCACTTTACATTTGGTTCT 16638 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 432354429388805