Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neobellieria_20bullata_20[genbank_20GCA_5F001017455.1_202015-06-01] 184,347 sequences; 396,224,597 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq74093 354 9e-93 seq164860 132 5e-26 seq126925 129 7e-25 seq33436 129 7e-25 seq33435 129 7e-25 seq55519 127 2e-24 seq44334 127 2e-24 seq171355 125 8e-24 seq67295 82.4 8e-11 >seq74093 Length=5834 Score = 354 bits (392), Expect = 9e-93 Identities = 507/709 (72%), Gaps = 4/709 (1%) Strand=Plus/Minus Query 92918 AATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTAGA 92977 ||||| | |||||| |||||||| || || | ||||| || |||||||||| || | Sbjct 1832 AATAAGCGATCAGCAACAAATTCAATATATTCGGACATTAATCCACAATTCATGCCAATT 1773 Query 92978 AGACGTACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGCTTCTTTCAAG 93037 | | ||||| || || || || ||||| |||| || ||| ||| || ||| | Sbjct 1772 AAATCAACAGGCAGGGCATCAGTTAAGAACTCTTGTTCAATTTTAACAGCCTCTGAAATA 1713 Query 93038 ATTTCTATTACTCTACTATTTGGT-GGTTTTTGTACGACATAATTGTACATTAAGCAC-G 93095 ||||| || | || || ||| | || ||| || | || ||| ||||||| ||| | Sbjct 1712 ATTTCAATAATCCT-CTCCTTGCTTGGACGTTGCACCAAATGTTTGAACATTAA-CACTG 1655 Query 93096 CAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCTG 93155 |||| || ||||| || || || || || ||||| ||||| |||||| | ||| | Sbjct 1654 CAAAATCACAGTGTAAGCCCTCATCACGAGAGATCAATTCATTAGAGAATGTAAGACCGG 1595 Query 93156 GTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATAC 93215 | | || || |||||||| | ||||||||| ||||| ||||| ||| || ||||||| Sbjct 1594 GCATAAGACCACGTTTCTTCAACCAAAATATAGAAGCGAAACTTCCACTGAAGAATATAC 1535 Query 93216 CTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCTGATCC 93275 |||| || || ||||| || | || |||||| |||| ||||| || || | |||| Sbjct 1534 CTTCAACAGCAGCAAAAGCAATGATGCGTTCGCCAAAGTTTGCTGATTTTGAGGAAATCC 1475 Query 93276 ATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTAAATA 93335 | |||||||||||| ||||| |||| || | |||||| | || ||||||| Sbjct 1474 AGGCTAAAGCCCAATCAGCTTTACGTTTAACGGCCGGCATTGTTTCAACGGCATTAAATA 1415 Query 93336 GGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAG 93395 |||| ||||| | ||| |||| ||||| ||||| || || | |||||||||| Sbjct 1414 GGTACTCTCGTTGGTCATTATCTGTAATGTAGGTATCAATCAAAATGCTGTACATTTCAG 1355 Query 93396 AATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCA 93455 | || || || ||||| || ||||| || || |||||||| | ||| || || | || | Sbjct 1354 AGTGAACGTTTTCCATGGCTATTTGAAAACCATAGAAACAACGAGCCTCAGTAACTTGAA 1295 Query 93456 CTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaaa 93515 |||| || || || | || || |||||||||||||||||||| ||||| || ||||||| Sbjct 1294 CTTCCTGGGAGAAGCGTTCAACCAGATTTTCATTGACTATACCGTCGGAAGCAGCAAAAA 1235 Query 93516 aaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAGCTTATCCCAATCGGATA 93575 | ||||| | ||| |||||||| |||| || |||| ||| ||||||||| | Sbjct 1234 AGGCCAAAACATGTGAAATAAAATGACGTTCATTGTCGGTAAGTCTATTCCAATCGGACA 1175 Query 93576 GATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGC 93624 ||| || ||||| |||||||| ||||||||||| || ||||| || Sbjct 1174 TATCAGAAGAGAGATCCACTTCTTCTACAGTCCAAAAAGAGGCTTCAGC 1126 >seq164860 Length=1214 Score = 132 bits (146), Expect = 5e-26 Identities = 87/95 (92%), Gaps = 2/95 (2%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322 |||||||||||||||| |||||||||||||||||||||| |||||||||| |||||| Sbjct 856 AGTCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGAGGGAGC 915 Query 126323 GTGGGTTCGAACCCCACACCTGACAAATTATTATT 126357 |||||||||||||||||||||||||||| ||| || Sbjct 916 GTGGGTTCGAACCCCACACCTGACAAATAATTGTT 950 Score = 118 bits (130), Expect = 1e-21 Identities = 78/86 (91%), Gaps = 2/86 (2%) Strand=Plus/Plus Query 126269 AGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGCGTGG 126326 || ||||||||| |||||||||||||||||||||| |||||||||| |||||||||| Sbjct 253 AGNTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGAGGGAGCGTGG 312 Query 126327 GTTCGAACCCCACACCTGACAAATTA 126352 ||||||||||||||||||||||| || Sbjct 313 GTTCGAACCCCACACCTGACAAAGTA 338 Score = 82.4 bits (90), Expect = 8e-11 Identities = 48/50 (96%), Gaps = 0/50 (0%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC 126314 |||||||||||||||| |||||||||||||||||||||| |||||||||| Sbjct 202 AGTCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCC 251 >seq126925 Length=3309 Score = 129 bits (142), Expect = 7e-25 Identities = 83/90 (92%), Gaps = 2/90 (2%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322 |||||||||||||||| |||||||||||||||||||||| |||||||||| |||||| Sbjct 2952 AGTCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGAGGGAGC 2893 Query 126323 GTGGGTTCGAACCCCACACCTGACAAATTA 126352 ||||||||||||||||||||||||||| || Sbjct 2892 GTGGGTTCGAACCCCACACCTGACAAAATA 2863 Score = 123 bits (136), Expect = 3e-23 Identities = 79/85 (93%), Gaps = 2/85 (2%) Strand=Plus/Minus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGCG 126323 ||||||||||||||| |||||||||||||||||||||| |||||||||| ||||||| Sbjct 176 GTCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGAGGGAGCG 117 Query 126324 TGGGTTCGAACCCCACACCTGACAA 126348 ||||||||||||||||||||||||| Sbjct 116 TGGGTTCGAACCCCACACCTGACAA 92 >seq33436 Length=1686 Score = 129 bits (142), Expect = 7e-25 Identities = 82/88 (93%), Gaps = 2/88 (2%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322 |||||||||||||||| |||||||||||||||||||||| |||||||||| |||||| Sbjct 572 AGTCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGAGGGAGC 513 Query 126323 GTGGGTTCGAACCCCACACCTGACAAAT 126350 |||||||||||||||||||||||||||| Sbjct 512 GTGGGTTCGAACCCCACACCTGACAAAT 485 >seq33435 Length=1555 Score = 129 bits (142), Expect = 7e-25 Identities = 82/88 (93%), Gaps = 2/88 (2%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322 |||||||||||||||| |||||||||||||||||||||| |||||||||| |||||| Sbjct 517 AGTCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGAGGGAGC 458 Query 126323 GTGGGTTCGAACCCCACACCTGACAAAT 126350 |||||||||||||||||||||||||||| Sbjct 457 GTGGGTTCGAACCCCACACCTGACAAAT 430 >seq55519 Length=1539 Score = 127 bits (140), Expect = 2e-24 Identities = 81/87 (93%), Gaps = 2/87 (2%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322 |||||||||||||||| |||||||||||||||||||||| |||||||||| |||||| Sbjct 198 AGTCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGAGGGAGC 257 Query 126323 GTGGGTTCGAACCCCACACCTGACAAA 126349 ||||||||||||||||||||||||||| Sbjct 258 GTGGGTTCGAACCCCACACCTGACAAA 284 Score = 125 bits (138), Expect = 8e-24 Identities = 80/86 (93%), Gaps = 2/86 (2%) Strand=Plus/Plus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGCG 126323 ||||||||||||||| |||||||||||||||||||||| |||||||||| ||||||| Sbjct 564 GTCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGAGGGAGCG 623 Query 126324 TGGGTTCGAACCCCACACCTGACAAA 126349 |||||||||||||||||||||||||| Sbjct 624 TGGGTTCGAACCCCACACCTGACAAA 649 Score = 125 bits (138), Expect = 8e-24 Identities = 80/86 (93%), Gaps = 2/86 (2%) Strand=Plus/Plus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGCG 126323 ||||||||||||||| |||||||||||||||||||||| |||||||||| ||||||| Sbjct 1405 GTCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGAGGGAGCG 1464 Query 126324 TGGGTTCGAACCCCACACCTGACAAA 126349 |||||||||||||||||||||||||| Sbjct 1465 TGGGTTCGAACCCCACACCTGACAAA 1490 >seq44334 Length=1742 Score = 127 bits (140), Expect = 2e-24 Identities = 81/87 (93%), Gaps = 2/87 (2%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322 |||||||||||||||| |||||||||||||||||||||| |||||||||| |||||| Sbjct 886 AGTCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGAGGGAGC 827 Query 126323 GTGGGTTCGAACCCCACACCTGACAAA 126349 ||||||||||||||||||||||||||| Sbjct 826 GTGGGTTCGAACCCCACACCTGACAAA 800 >seq171355 Length=1011 Score = 125 bits (138), Expect = 8e-24 Identities = 80/86 (93%), Gaps = 2/86 (2%) Strand=Plus/Plus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGCG 126323 ||||||||||||||| |||||||||||||||||||||| |||||||||| ||||||| Sbjct 281 GTCAGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGAGGGAGCG 340 Query 126324 TGGGTTCGAACCCCACACCTGACAAA 126349 |||||||||||||||||||||||||| Sbjct 341 TGGGTTCGAACCCCACACCTGACAAA 366 >seq67295 Length=3192 Score = 82.4 bits (90), Expect = 8e-11 Identities = 73/89 (82%), Gaps = 3/89 (3%) Strand=Plus/Plus Query 162735 TaaaaaaaTCAGAATTACCTCTTGTGAGAATCGAACTCACGACAACCGGCGTATAAGACC 162794 |||||||| |||||| |||| |||||| || ||||||||||| | || || |||||| Sbjct 2945 TAAAAAAA--AGAATTGCCTCCTGTGAGGATTGAACTCACGACCCCTGGTTTACAAGACC 3002 Query 162795 GATGCTCTAACCACTGAGCTAAAGAGGCT 162823 |||||| ||||||||||||||||||| Sbjct 3003 AGTGCTCT-GCCACTGAGCTAAAGAGGCT 3030 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 555577604776280