Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neobellieria_20bullata_20[genbank_20GCA_5F001017455.1_202015-06-01] 184,347 sequences; 396,224,597 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq47065 145 6e-30 seq175855 143 2e-29 seq7894 143 2e-29 seq55885 116 3e-21 >seq47065 Length=7920 Score = 145 bits (160), Expect = 6e-30 Identities = 169/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| |||||||| || || |||| || || || | || ||||| || ||| | | Sbjct 2655 ATGCAGATTTTTGTAAAGACCCTAACGGGCAAGACCATTACACTTGAGGTCGAACCTTCT 2714 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || ||||| || ||||| ||||| ||||| |||||||| ||||| Sbjct 2715 GATACTATCGAAAATGTCAAAGCCAAGATTCAGGACAAAGAGGGAATTCCACCAGATCAG 2774 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 |||||||| || ||||| || ||||| || || ||| || ||| | |||||||||||| Sbjct 2775 CAACGTCTAATTTTTGCTGGAAAACAATTGGAAGATGGACGTACCCTATCCGATTACAAC 2834 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || ||||| ||||| || | |||||||| || || | || || ||| Sbjct 2835 ATCCAAAAGGAATCAACTTTGCATTTAGTGTTACGCCTCCGTGGTGGT 2882 >seq175855 Length=19510 Score = 143 bits (158), Expect = 2e-29 Identities = 183/250 (73%), Gaps = 3/250 (1%) Strand=Plus/Plus Query 22200 GTTTTATACA--TTTGTAA-AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGT 22256 ||||||| | ||||| | ||||||| || || || |||||| |||| |||||||| | Sbjct 16405 GTTTTATTTAATTTTGTTACAGATGCAGATCTTCGTCAAAACTCTAACTGGTAAAACCAT 16464 Query 22257 CACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAA 22316 ||| | ||||| || | |||| || | || || |||| ||||| |||||||| Sbjct 16465 CACCTTGGAAGTTGAGCCTTCCGACACTATTGAAAATGTCAAGGCTAAAATCCAAGACAA 16524 Query 22317 GGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCA 22376 || ||||| || || |||||||||||| | || || || || || || || || ||| Sbjct 16525 AGAAGGTATCCCCCCAGATCAACAACGTTTGATCTTCGCTGGTAAGCAATTGGAAGATGG 16584 Query 22377 CCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATT 22436 |||||| | ||||| |||||||| ||||| |||||||| ||||||| ||| | || | Sbjct 16585 TCGCACCTTGTCCGACTACAACATCCAAAAGGAATCCACTTTACATTTGGTTCTCCGTCT 16644 Query 22437 GCGCGGAGGT 22446 || || ||| Sbjct 16645 TCGTGGTGGT 16654 >seq7894 Length=2644 Score = 143 bits (158), Expect = 2e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| ||||| || || | || || ||||| ||||| | || || || | || Sbjct 2311 ATGCAAATCTTTGTCAAGACACTGACTGGCAAAACCATCACTTTAGAGGTTGAGCCTTCC 2370 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || || | ||| ||||||||||||||||| || || || || |||||| Sbjct 2371 GATACTATTGAAAATGTTAAAGCTAAAATTCAAGACAAGGAAGGAATCCCTCCAGATCAA 2430 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 |||||| | || || || |||||||| || || || ||||| | || |||||||| Sbjct 2431 CAACGTTTAATCTTCGCTGGCAAACAATTGGAAGACGGGCGCACATTGTCTGATTACAAT 2490 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 |||||||||||||| || | ||||| || ||||| ||||| || || Sbjct 2491 ATTCAAAAAGAATCTACATTGCATTTGGTATTGCGTTTGCGTGGTGG 2537 Score = 134 bits (148), Expect = 1e-26 Identities = 158/214 (74%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 22215 AAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAAC 22274 ||| ||||| || || || || |||||||| || || || |||| | || || ||| | Sbjct 2079 AAAAATGCAGATCTTCGTGAAGACTTTAACTGGCAAGACCATCACCTTAGAGGTCGAACC 2138 Query 22275 CACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGA 22334 | ||||| | || | |||| ||||||||||| ||||||||||| || || || Sbjct 2139 TTCTGATACTATTGAGAACGTCAAGGCTAAAATTCAAGATAAGGAGGGTATCCCCCCAGA 2198 Query 22335 TCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTA 22394 |||||||||| | || |||||||||||||| || || || ||||| | |||||||| Sbjct 2199 TCAACAACGTTTAATTTTTGCCGGCAAACAATTGGAAGACGGACGCACTTTGTCCGATTA 2258 Query 22395 CAACATTCAAAAAGAATCCACCATACATTTAGTT 22428 || |||||||| ||||| || | ||||| ||| Sbjct 2259 TAATATTCAAAAGGAATCAACACTTCATTTGGTT 2292 >seq55885 Length=1496 Score = 116 bits (128), Expect = 3e-21 Identities = 112/144 (78%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || ||||||||||| |||||||| || |||||||||||||| || || ||||| ||| Sbjct 6 AAGATCCAAGACAAGGAAGGTATTCCCCCAGATCAACAACGTCTCATCTTCGCCGGTAAA 65 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACAT 22422 ||||| ||||| || || | ||||| ||||| || ||||| ||||||||| | || Sbjct 66 CAGTTGGAGGACGGTCGTACTTTGTCCGACTACAATATCCAAAAGGAATCCACCCTTCAC 125 Query 22423 TTAGTTTTGCGATTGCGCGGAGGT 22446 || || ||||| | || || ||| Sbjct 126 TTGGTATTGCGTCTCCGTGGTGGT 149 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418784984904055