Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neobellieria_20bullata_20[genbank_20GCA_5F001017455.1_202015-06-01] 184,347 sequences; 396,224,597 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq175855 131 1e-25 seq47065 123 2e-23 seq7894 123 2e-23 seq55885 104 2e-17 >seq175855 Length=19510 Score = 131 bits (144), Expect = 1e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | ||| ||||||| || ||||| ||||| |||||||| ||| Sbjct 16656 ATACCACCACGAAGACGGAGAACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCG 16597 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || || ||| |||||| | ||| ||||||||| |||| | ||| ||||| || || Sbjct 16596 GACAAGGTGCGACCATCTTCCAATTGCTTACCAGCGAAGATCAAACGTTGTTGATCTGGG 16537 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || ||||||||||| || || || | | ||||| ||||||| | || Sbjct 16536 GGGATACCTTCTTTGTCTTGGATTTTAGCCTTGACATTTTCAATAGTGTCGGAAGGCTCA 16477 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| ||| | ||||| || || |||||||| || || |||||||| Sbjct 16476 ACTTCCAAGGTGATGGTTTTACCAGTTAGAGTTTTGACGAAGATCTGCAT 16427 >seq47065 Length=7920 Score = 123 bits (136), Expect = 2e-23 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214 ||| ||||| || | || |||||||| | || ||||| ||||| |||||||||||| Sbjct 2882 ACCACCACGGAGGCGTAACACTAAATGCAAAGTTGATTCCTTTTGGATGTTGTAATCGGA 2823 Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274 | ||||| |||||| | |||||| ||||| | || ||||| || || || || || Sbjct 2822 TAGGGTACGTCCATCTTCCAATTGTTTTCCAGCAAAAATTAGACGTTGCTGATCTGGTGG 2763 Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334 ||| || |||||||| |||||| ||| | | ||| | || || | | |||||| Sbjct 2762 AATTCCCTCTTTGTCCTGAATCTTGGCTTTGACATTTTCGATAGTATCAGAAGGTTCGAC 2703 Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGC 114385 || | || | || ||||| || || || ||||||||||||||||| || Sbjct 2702 CTCAAGTGTAATGGTCTTGCCCGTTAGGGTCTTTACAAAAATCTGCATTGC 2652 >seq7894 Length=2644 Score = 123 bits (136), Expect = 2e-23 Identities = 168/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || ||||| | | ||| || ||||| | ||||||||||||||||| |||||||| Sbjct 2540 ATGCCACCACGCAAACGCAATACCAAATGCAATGTAGATTCTTTTTGAATATTGTAATCA 2481 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || || || ||||| | |||||| |||||| |||| | ||| ||||| || ||| Sbjct 2480 GACAATGTGCGCCCGTCTTCCAATTGTTTGCCAGCGAAGATTAAACGTTGTTGATCTGGA 2421 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGC-TGTTCAACGGTGTCGGTGGATTC 114331 || || ||||| ||||| ||| ||| | |||| | | ||||| || |||| | || Sbjct 2420 GGGATTCCTTCCTTGTCTTGAAT-TTTAGCTTTAACATTTTCAATAGTATCGGAAGGCTC 2362 Query 114332 GACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 || || | || | |||||||| ||||| || || ||||| || |||||| Sbjct 2361 AACCTCTAAAGTGATGGTTTTGCCAGTCAGTGTCTTGACAAAGATTTGCATG 2310 >seq55885 Length=1496 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 114171 AAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCT 114230 || || ||||| | |||||||| || ||||| || || || || ||| || |||| Sbjct 361 AACACCAAATGGAGTGTAGATTCCTTCTGAATATTATAGTCCGACAAAGTGCGGCCATCT 302 Query 114231 TCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCG 114290 || | ||||||||| ||| | || | ||||||||| || || ||||| ||||| || || Sbjct 301 TCCAATTGTTTACCGGCGAAAATTAAACGCTGTTGATCTGGGGGAATACCTTCCTTATCC 242 Query 114291 GCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTT 114350 |||||| |||| | |||| || || | | ||| || |||| ||| | ||| Sbjct 241 TGAATCTTGGCCTTTACATTCTCAATAGTATCAGAAGGTTCCACTTCCAAGGTGATGGTT 182 Query 114351 TTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || |||| || || || ||||||||||| Sbjct 181 TTTCCAGTCAAGGTCTTGACGAAAATCTGCAT 150 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419190471833364