Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neobellieria_20bullata_20[genbank_20GCA_5F001017455.1_202015-06-01] 184,347 sequences; 396,224,597 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq7894 134 3e-26 seq55885 127 5e-24 seq47065 127 5e-24 >seq7894 Length=2644 Score = 134 bits (148), Expect = 3e-26 Identities = 173/236 (73%), Gaps = 7/236 (3%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| || || | || || | ||||| || ||| ||||| |||||||| | Sbjct 2313 CATG-CCACCACGAAGACGTAGAACCAAATGAAGTGTTGATTCCTTTTGAATATTATAAT 2255 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 ||| | |||||||||||||| |||||||| || || || || | ||| ||||| || Sbjct 2254 CGGACAAAGTGCGTCCGTCTTCCAATTGTTTGCCGGCAAAAATTAAACGTTGTTG---AT 2198 Query 288362 CT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCG 288418 || ||||| || || ||||| || ||||| || || ||||| || |||| ||| | Sbjct 2197 CTGGGGGGATACCCTCCTTATCTTGAATTTTAGCCTTGACGTTCTCAATAGTATCAGAAG 2138 Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 ||| || || | ||||| ||||| || || | |||||| ||||| ||||||||| Sbjct 2137 GTTCGACCTCTAAGGTGATGGTCTTGCCAGTTAAAGTCTTCACGAAGATCTGCATT 2082 Score = 132 bits (146), Expect = 1e-25 Identities = 147/195 (75%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||||||||| ||||| || || | | ||||| |||||||| |||||||| || ||||| Sbjct 2502 TTCTTTTTGAATATTGTAATCAGACAATGTGCGCCCGTCTTCCAATTGTTTGCCAGCGAA 2443 Query 288342 GATCAGACGCTGTTGAGAATCTGG---GATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398 ||| | ||| |||||| ||||| ||||||||| || || || ||||| ||||| || Sbjct 2442 GATTAAACGTTGTTGA---TCTGGAGGGATTCCTTCCTTGTCTTGAATTTTAGCTTTAAC 2386 Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458 ||||| |||| |||| | || || || | ||||| || || || ||||| ||||| Sbjct 2385 ATTTTCAATAGTATCGGAAGGCTCAACCTCTAAAGTGATGGTTTTGCCAGTCAGTGTCTT 2326 Query 288459 GACGAATATCTGCAT 288473 ||| || || ||||| Sbjct 2325 GACAAAGATTTGCAT 2311 >seq55885 Length=1496 Score = 127 bits (140), Expect = 5e-24 Identities = 146/195 (75%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| || || ||||||||||| | | ||||| || ||||| |||||||| || ||||| Sbjct 341 TTCCTTCTGAATATTATAGTCCGACAAAGTGCGGCCATCTTCCAATTGTTTACCGGCGAA 282 Query 288342 GATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398 || | |||||||||| |||||| || ||||| |||||||| || || || || || Sbjct 281 AATTAAACGCTGTTGA---TCTGGGGGAATACCTTCCTTATCCTGAATCTTGGCCTTTAC 225 Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458 || || |||| ||| | ||| ||||| | ||||| || || || |||| ||||| Sbjct 224 ATTCTCAATAGTATCAGAAGGTTCCACTTCCAAGGTGATGGTTTTTCCAGTCAAGGTCTT 165 Query 288459 GACGAATATCTGCAT 288473 |||||| |||||||| Sbjct 164 GACGAAAATCTGCAT 150 Score = 89.7 bits (98), Expect = 1e-12 Identities = 110/149 (74%), Gaps = 6/149 (4%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | | ||| | |||| ||| ||| ||||||||||| ||||||| Sbjct 148 CCACCACGGAGACGCAATACCAAGTGAAGGGTGGATTCCTTTTGGATATTGTAGTCGGAC 89 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || || ||||| || || ||||| || |||||||| ||||| ||||| ||||||| Sbjct 88 AAAGTACGACCGTCCTCCAACTGTTTACCGGCGAAGATGAGACGTTGTTG---ATCTGGG 32 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGC 288392 || ||||| || || ||||| || || Sbjct 31 GGAATACCTTCCTTGTCTTGGATCTTAGC 3 >seq47065 Length=7920 Score = 127 bits (140), Expect = 5e-24 Identities = 144/193 (75%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| |||||||| || || |||| || || ||||| ||||| ||||||||||| || || Sbjct 2846 TTCCTTTTGGATGTTGTAATCGGATAGGGTACGTCCATCTTCCAATTGTTTTCCAGCAAA 2787 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 || ||||| || ||| ||| ||||| ||||| ||||| || || ||||| || || Sbjct 2786 AATTAGACGTTGCTGATCTGGTGGAATTCCCTCTTTGTCCTGAATCTTGGCTTTGACATT 2727 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 ||| |||| ||| | ||| || || || || || ||||| || || || ||||| || Sbjct 2726 TTCGATAGTATCAGAAGGTTCGACCTCAAGTGTAATGGTCTTGCCCGTTAGGGTCTTTAC 2667 Query 288462 GAATATCTGCATT 288474 || ||||||||| Sbjct 2666 AAAAATCTGCATT 2654 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1176868120082266