Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neobellieria_20bullata_20[genbank_20GCA_5F001017455.1_202015-06-01] 184,347 sequences; 396,224,597 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq7894 113 5e-20 seq47065 91.5 2e-13 seq167334 87.8 2e-12 seq151712 87.8 2e-12 seq145033 87.8 2e-12 seq143794 87.8 2e-12 seq72910 87.8 2e-12 seq63742 87.8 2e-12 seq51381 87.8 2e-12 seq49125 87.8 2e-12 seq42591 87.8 2e-12 seq30748 87.8 2e-12 seq127435 86.0 7e-12 seq89510 86.0 7e-12 seq163553 84.2 2e-11 seq122653 84.2 2e-11 seq108298 84.2 2e-11 seq45586 84.2 2e-11 seq9833 84.2 2e-11 seq112003 82.4 8e-11 seq52097 82.4 8e-11 >seq7894 Length=2644 Score = 113 bits (124), Expect = 5e-20 Identities = 158/219 (72%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 41991 AAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGC 42050 |||||||| |||||||||||||| || ||||||||||||||||||| || || ||| Sbjct 2528 AAACGCAATACCAAATGCAATGTAGATTCTTTTTGAATATTGTAATCAGACAATGTGCGC 2469 Query 42051 TCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCC 42110 |||| || | || || |||||||| || | || || || || | || | | ||| Sbjct 2468 CCGTCTTCCAATTGTTTGCCAGCGAAGATTAAACGTTGTTGATCTGGAGGGATTCCTTCC 2409 Query 42111 TTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGT 42169 |||| | ||| |||| | ||| | | | | || ||| | || || || | || Sbjct 2408 TTGT-CTTGAATTTTAGCTTTAACATTTTCAATAGTATCGGAAGGCTCAACCTCTAAAGT 2350 Query 42170 GATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 |||||||||||| || || ||||| |||||||||||||| Sbjct 2349 GATGGTTTTGCCAGTCAGTGTCTTGACAAAGATTTGCAT 2311 >seq47065 Length=7920 Score = 91.5 bits (100), Expect = 2e-13 Identities = 152/217 (70%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 41994 CGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCG 42053 || ||||| |||||||| || |||||||| || |||||||| | || || || | Sbjct 2869 CGTAACACTAAATGCAAAGTTGATTCCTTTTGGATGTTGTAATCGGATAGGGTACGTCCA 2810 Query 42054 TCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTG 42113 || || | || || ||||| || || || || ||||| || | ||| | | ||| ||| Sbjct 2809 TCTTCCAATTGTTTTCCAGCAAAAATTAGACGTTGCTGATCTGGTGGAATTCCCTCTTTG 2750 Query 42114 TCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 42172 ||| ||| | || | ||||| | | | || || | ||| || || | || || Sbjct 2749 TCC-TGAATCTTGGCTTTGACATTTTCGATAGTATCAGAAGGTTCGACCTCAAGTGTAAT 2691 Query 42173 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 42209 ||| ||||||||||| ||||||||||| || |||||| Sbjct 2690 GGTCTTGCCCGTTAGGGTCTTTACAAAAATCTGCATT 2654 >seq167334 Length=1974 Score = 87.8 bits (96), Expect = 2e-12 Identities = 69/82 (84%), Gaps = 2/82 (2%) Strand=Plus/Plus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 ||||| || | | ||| |||||| ||||||||||||||||||||| ||||| |||||| Sbjct 918 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACT 977 Query 57066 ATACTACCGAGGA--TTGAATA 57085 |||||| |||||| ||||||| Sbjct 978 ATACTATCGAGGATGTTGAATA 999 >seq151712 Length=1267 Score = 87.8 bits (96), Expect = 2e-12 Identities = 66/78 (85%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 57002 ATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCAC 57061 |||| |||| || | | ||| |||||| ||||||||||||||||||||| ||||| || Sbjct 324 ATTTCCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGAC 265 Query 57062 CACTATACTACCGAGGAT 57079 |||||||||| ||||||| Sbjct 264 CACTATACTATCGAGGAT 247 >seq145033 Length=1537 Score = 87.8 bits (96), Expect = 2e-12 Identities = 65/76 (86%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 ||||| || | | ||| |||||| ||||||||||||||||||||| ||||| |||||| Sbjct 1202 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 1143 Query 57066 ATACTACCGAGGATTG 57081 |||||| ||||||||| Sbjct 1142 ATACTATCGAGGATTG 1127 >seq143794 Length=1385 Score = 87.8 bits (96), Expect = 2e-12 Identities = 69/83 (83%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 56997 GAAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATA 57056 ||| || || |||| || | | ||| |||||| ||||||||||||||||||||| ||| Sbjct 623 GAATAAATTCCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATA 564 Query 57057 CTCACCACTATACTACCGAGGAT 57079 || |||||||||||| ||||||| Sbjct 563 CTGACCACTATACTATCGAGGAT 541 Score = 84.2 bits (92), Expect = 2e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 ||||| || | | ||| |||||| ||||||||||||||||||||| ||||| |||||| Sbjct 200 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 141 Query 57066 ATACTACCGAGGAT 57079 |||||| ||||||| Sbjct 140 ATACTATCGAGGAT 127 >seq72910 Length=1076 Score = 87.8 bits (96), Expect = 2e-12 Identities = 68/80 (85%), Gaps = 1/80 (1%) Strand=Plus/Minus Query 57001 AATTT-TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTC 57059 ||||| ||||| || | | ||| |||||| ||||||||||||||||||||| ||||| Sbjct 196 AATTTATCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTG 137 Query 57060 ACCACTATACTACCGAGGAT 57079 |||||||||||| ||||||| Sbjct 136 ACCACTATACTATCGAGGAT 117 >seq63742 Length=1478 Score = 87.8 bits (96), Expect = 2e-12 Identities = 65/76 (86%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | ||| |||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 1182 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 1123 Query 57067 TACTACCGAGGATTGA 57082 ||||| |||||||||| Sbjct 1122 TACTATCGAGGATTGA 1107 >seq51381 Length=3611 Score = 87.8 bits (96), Expect = 2e-12 Identities = 65/76 (86%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | ||| |||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 2262 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 2203 Query 57067 TACTACCGAGGATTGA 57082 ||||| |||||||||| Sbjct 2202 TACTATCGAGGATTGA 2187 Score = 86.0 bits (94), Expect = 7e-12 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | ||| |||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 2516 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 2457 Query 57067 TACTACCGAGGATTG 57081 ||||| ||||||||| Sbjct 2456 TACTATCGAGGATTG 2442 Score = 86.0 bits (94), Expect = 7e-12 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | ||| |||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 2770 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 2711 Query 57067 TACTACCGAGGATTG 57081 ||||| ||||||||| Sbjct 2710 TACTATCGAGGATTG 2696 Score = 86.0 bits (94), Expect = 7e-12 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | ||| |||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 3024 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 2965 Query 57067 TACTACCGAGGATTG 57081 ||||| ||||||||| Sbjct 2964 TACTATCGAGGATTG 2950 >seq49125 Length=3017 Score = 87.8 bits (96), Expect = 2e-12 Identities = 69/83 (83%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 56997 GAAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATA 57056 ||| || || |||| || | | ||| |||||| ||||||||||||||||||||| ||| Sbjct 1230 GAATAAATTCCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATA 1171 Query 57057 CTCACCACTATACTACCGAGGAT 57079 || |||||||||||| ||||||| Sbjct 1170 CTGACCACTATACTATCGAGGAT 1148 Score = 84.2 bits (92), Expect = 2e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 ||||| || | | ||| |||||| ||||||||||||||||||||| ||||| |||||| Sbjct 393 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 334 Query 57066 ATACTACCGAGGAT 57079 |||||| ||||||| Sbjct 333 ATACTATCGAGGAT 320 Score = 84.2 bits (92), Expect = 2e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 ||||| || | | ||| |||||| ||||||||||||||||||||| ||||| |||||| Sbjct 807 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 748 Query 57066 ATACTACCGAGGAT 57079 |||||| ||||||| Sbjct 747 ATACTATCGAGGAT 734 >seq42591 Length=2525 Score = 87.8 bits (96), Expect = 2e-12 Identities = 65/76 (86%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 ||||| || | | ||| |||||| ||||||||||||||||||||| ||||| |||||| Sbjct 2009 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 1950 Query 57066 ATACTACCGAGGATTG 57081 |||||| ||||||||| Sbjct 1949 ATACTATCGAGGATTG 1934 >seq30748 Length=2634 Score = 87.8 bits (96), Expect = 2e-12 Identities = 69/83 (83%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 56997 GAAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATA 57056 ||| || || |||| || | | ||| |||||| ||||||||||||||||||||| ||| Sbjct 748 GAATAAATTCCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATA 689 Query 57057 CTCACCACTATACTACCGAGGAT 57079 || |||||||||||| ||||||| Sbjct 688 CTGACCACTATACTATCGAGGAT 666 Score = 84.2 bits (92), Expect = 2e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 ||||| || | | ||| |||||| ||||||||||||||||||||| ||||| |||||| Sbjct 335 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 276 Query 57066 ATACTACCGAGGAT 57079 |||||| ||||||| Sbjct 275 ATACTATCGAGGAT 262 >seq127435 Length=1024 Score = 86.0 bits (94), Expect = 7e-12 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 57005 TTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 57064 |||||| || | | ||| |||||| ||||||||||||||||||||| ||||| ||||| Sbjct 305 TTCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCAC 246 Query 57065 TATACTACCGAGGAT 57079 ||||||| ||||||| Sbjct 245 TATACTATCGAGGAT 231 >seq89510 Length=3449 Score = 86.0 bits (94), Expect = 7e-12 Identities = 68/81 (84%), Gaps = 2/81 (2%) Strand=Plus/Minus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | ||| |||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 1398 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 1339 Query 57067 TACTACCGAGGA--TTGAATA 57085 ||||| |||||| ||||||| Sbjct 1338 TACTATCGAGGATGTTGAATA 1318 >seq163553 Length=1573 Score = 84.2 bits (92), Expect = 2e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 ||||| || | | ||| |||||| ||||||||||||||||||||| ||||| |||||| Sbjct 892 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACT 833 Query 57066 ATACTACCGAGGAT 57079 |||||| ||||||| Sbjct 832 ATACTATCGAGGAT 819 Score = 82.4 bits (90), Expect = 8e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | ||| |||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 211 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 152 Query 57067 TACTACCGAGGATTG 57081 ||||| |||||| || Sbjct 151 TACTATCGAGGACTG 137 Score = 82.4 bits (90), Expect = 8e-11 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | ||| |||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 586 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 527 Query 57067 TACTACCGAGGAT 57079 ||||| ||||||| Sbjct 526 TACTATCGAGGAT 514 >seq122653 Length=1768 Score = 84.2 bits (92), Expect = 2e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 ||||| || | | ||| |||||| ||||||||||||||||||||| ||||| |||||| Sbjct 147 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 88 Query 57066 ATACTACCGAGGAT 57079 |||||| ||||||| Sbjct 87 ATACTATCGAGGAT 74 >seq108298 Length=2365 Score = 84.2 bits (92), Expect = 2e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 ||||| || | | ||| |||||| ||||||||||||||||||||| ||||| |||||| Sbjct 683 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 624 Query 57066 ATACTACCGAGGAT 57079 |||||| ||||||| Sbjct 623 ATACTATCGAGGAT 610 >seq45586 Length=2524 Score = 84.2 bits (92), Expect = 2e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 ||||| || | | ||| |||||| ||||||||||||||||||||| ||||| |||||| Sbjct 941 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACT 1000 Query 57066 ATACTACCGAGGAT 57079 |||||| ||||||| Sbjct 1001 ATACTATCGAGGAT 1014 >seq9833 Length=1816 Score = 84.2 bits (92), Expect = 2e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 ||||| || | | ||| |||||| ||||||||||||||||||||| ||||| |||||| Sbjct 1320 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACT 1379 Query 57066 ATACTACCGAGGAT 57079 |||||| ||||||| Sbjct 1380 ATACTATCGAGGAT 1393 Score = 84.2 bits (92), Expect = 2e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 ||||| || | | ||| |||||| ||||||||||||||||||||| ||||| |||||| Sbjct 1627 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 1686 Query 57066 ATACTACCGAGGAT 57079 |||||| ||||||| Sbjct 1687 ATACTATCGAGGAT 1700 >seq112003 Length=1792 Score = 82.4 bits (90), Expect = 8e-11 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | ||| |||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 1526 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 1467 Query 57067 TACTACCGAGGAT 57079 ||||| ||||||| Sbjct 1466 TACTATCGAGGAT 1454 >seq52097 Length=2084 Score = 82.4 bits (90), Expect = 8e-11 Identities = 54/60 (90%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 57020 AATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAGGAT 57079 ||| |||||| ||||||||||||||||||||| ||||| |||||||||||| ||||||| Sbjct 329 AATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTATACTATCGAGGAT 388 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 541961054374480