Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neobellieria_20bullata_20[genbank_20GCA_5F001017455.1_202015-06-01] 184,347 sequences; 396,224,597 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq7894 120 3e-22 seq175855 113 4e-20 seq47065 86.0 6e-12 seq55885 82.4 8e-11 >seq7894 Length=2644 Score = 120 bits (132), Expect = 3e-22 Identities = 166/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| || ||||||||||| || ||||| | | || || |||||||| ||||| || Sbjct 2538 GCCACCACGCAAACGCAATACCAAATGCAATGTAGATTCTTTTTGAATATTGTAATCAGA 2479 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 || || ||| ||| || | |||||| || | |||||| ||| ||||| || ||||| Sbjct 2478 CAATGTGCGCCCGTCTTCCAATTGTTTGCCAGCGAAGATTAAACGTTGTTGATCTGGAGG 2419 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAA-TTGTTCCACGGTGTCGGTCGACTCCA 138565 || ||||| ||||| ||| |||| | ||||| | ||| | || |||| | ||| | Sbjct 2418 GATTCCTTCCTTGTC-TTGAATTTTAGCTTTAACATTTTCAATAGTATCGGAAGGCTCAA 2360 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 |||| | || | ||||| |||||||| || || ||||| || |||||| Sbjct 2359 CCTCTAAAGTGATGGTTTTGCCAGTCAGTGTCTTGACAAAGATTTGCATG 2310 >seq175855 Length=19510 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| | ||| ||||||| | || |||||||| |||||||||||| | Sbjct 16653 CCACCACGAAGACGGAGAACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCGGAC 16594 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || || || | ||| ||||| | |||| | ||| ||||| || || || Sbjct 16593 AAGGTGCGACCATCTTCCAATTGCTTACCAGCGAAGATCAAACGTTGTTGATCTGGGGGG 16534 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 |||||||||||||| |||||| || | | ||| | ||||||| | ||| || Sbjct 16533 ATACCTTCTTTGTCTTGGATTTTAGCCTTGACATTTTCAATAGTGTCGGAAGGCTCAACT 16474 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | ||||||||||| |||||||| || || |||||||| Sbjct 16473 TCCAAGGTGATGGTTTTACCAGTTAGAGTTTTGACGAAGATCTGCAT 16427 >seq47065 Length=7920 Score = 86.0 bits (94), Expect = 6e-12 Identities = 152/219 (69%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 138400 CGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAG 138459 || || |||||||| | |||| |||||||| |||||||| ||| | ||||| Sbjct 2869 CGTAACACTAAATGCAAAGTTGATTCCTTTTGGATGTTGTAATCGGATAGGGTACGTCCA 2810 Query 138460 TCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTG 138519 || || | |||||| || | | | |||||||| || || || || || || || |||||| Sbjct 2809 TCTTCCAATTGTTTTCCAGCAAAAATTAGACGTTGCTGATCTGGTGGAATTCCCTCTTTG 2750 Query 138520 TCGGTGATTTTTTGTTTTAAT-TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAG 138578 || ||| | || | ||| | | ||| | || || | | || ||||| | || | Sbjct 2749 TCC-TGAATCTTGGCTTTGACATTTTCGATAGTATCAGAAGGTTCGACCTCAAGTGTAAT 2691 Query 138579 CGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATGGC 138617 || || || || || || ||||||||||||||||| || Sbjct 2690 GGTCTTGCCCGTTAGGGTCTTTACAAAAATCTGCATTGC 2652 >seq55885 Length=1496 Score = 82.4 bits (90), Expect = 8e-11 Identities = 157/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| || || | ||| || || ||||| | | || ||||| ||||| || ||||| Sbjct 377 GCCTCCGCGAAGACGTAACACCAAATGGAGTGTAGATTCCTTCTGAATATTATAGTCCGA 318 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 || ||| || || || | ||||||||||| | |||| ||||||||| || || || Sbjct 317 CAAAGTGCGGCCATCTTCCAATTGTTTACCGGCGAAAATTAAACGCTGTTGATCTGGGGG 258 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565 |||||||| || || ||| | || | |||| | || | || || | | |||| Sbjct 257 AATACCTTCCTTATC-CTGAATCTTGGCCTTTACATTCTCAATAGTATCAGAAGGTTCCA 199 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 | || | || | ||||| ||||||| || || || ||||||||||| Sbjct 198 CTTCCAAGGTGATGGTTTTTCCAGTCAAGGTCTTGACGAAAATCTGCAT 150 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 495118843941840