Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neobellieria_20bullata_20[genbank_20GCA_5F001017455.1_202015-06-01] 184,347 sequences; 396,224,597 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq7894 159 2e-34 seq47065 122 6e-23 seq175855 107 1e-18 seq55885 107 1e-18 seq145162 93.3 3e-14 >seq7894 Length=2644 Score = 159 bits (176), Expect = 2e-34 Identities = 175/231 (76%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 14948 TGCCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGC 15007 ||||||| ||||| | || || ||||| | ||||| |||||||| || |||||||| Sbjct 2539 TGCCACCACGCAAACGCAATACCAAATGCAATGTAGATTCTTTTTGAATATTGTAATCA- 2481 Query 15008 TGAGAATTCTCGC--GTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTT 15065 || ||| ||| |||||| ||||||||||||||| | || ||||| ||||| || Sbjct 2480 -GACAATGTGCGCCCGTCTTCCAATTGTTTGCCAGCGAAGATTAAACGTTGTTGATCTGG 2422 Query 15066 TGGAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTC 15125 || |||||||||||||| |||||| ||| ||| |||| ||||||||| | || Sbjct 2421 AGGGATTCCTTCCTTGTCTTGAATTTTAGCTTTAACATTTTCAATAGTATCGGAAGGCTC 2362 Query 15126 TACGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || ||||| || |||||||| || ||||| || || ||||| |||||||| Sbjct 2361 AACCTCTAAAGTGATGGTTTTGCCAGTCAGTGTCTTGACAAAGATTTGCAT 2311 Score = 109 bits (120), Expect = 4e-19 Identities = 165/235 (70%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 14948 TGCCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGC 15007 ||||||| || | | || ||| |||||||| || || || ||||| || || |||||| Sbjct 2311 TGCCACCACGAAGACGTAGAACCAAATGAAGTGTTGATTCCTTTTGAATATTATAATCGG 2252 Query 15008 TGAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067 | | | | ||||||| ||||||||||| || | || ||||| ||||| || | Sbjct 2251 ACAAAGTGCGTCCGTCTTCCAATTGTTTGCCGGCAAAAATTAAACGTTGTTGATCTGGGG 2192 Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127 | || || ||||| || |||||| || || | || |||||||| | ||| | Sbjct 2191 GGATACCCTCCTTATCTTGAATTTTAGCCTTGACGTTCTCAATAGTATCAGAAGGTTCGA 2132 Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATTTGA 15182 | |||||||| ||||| || || || | ||| || || || || ||||| ||||| Sbjct 2131 CCTCTAAGGTGATGGTCTTGCCAGTTAAAGTCTTCACGAAGATCTGCATTTTTGA 2077 >seq47065 Length=7920 Score = 122 bits (134), Expect = 6e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||| || | | ||| |||||||| | || || || ||||| |||||||||||| Sbjct 2881 CCACCACGGAGGCGTAACACTAAATGCAAAGTTGATTCCTTTTGGATGTTGTAATCGGAT 2822 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || | | | ||||| |||||||| ||||| | || | ||| || || || |||| Sbjct 2821 AGGGTACGTCCATCTTCCAATTGTTTTCCAGCAAAAATTAGACGTTGCTGATCTGGTGGA 2762 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 ||||| || ||||| ||| ||| ||| ||| |||| |||||||| | ||| || Sbjct 2761 ATTCCCTCTTTGTCCTGAATCTTGGCTTTGACATTTTCGATAGTATCAGAAGGTTCGACC 2702 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || | |||||||| || || || || || ||||||||||| ||||| Sbjct 2701 TCAAGTGTAATGGTCTTGCCCGTTAGGGTCTTTACAAAAATCTGCAT 2655 >seq175855 Length=19510 Score = 107 bits (118), Expect = 1e-18 Identities = 152/212 (72%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 14967 AACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCG--CGTCT 15024 ||| ||||| | || || || ||||| |||||||| ||| || || || | ||| Sbjct 16636 AACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCG--GACAAGGTGCGACCATCT 16579 Query 15025 TCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCA 15084 || ||||| || |||||| | |||||||| ||||| || || || ||||| ||||| Sbjct 16578 TCCAATTGCTTACCAGCGAAGATCAAACGTTGTTGATCTGGGGGGATACCTTCTTTGTCT 16519 Query 15085 CAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTT 15144 ||||| || ||| |||| ||||| ||| | || || || ||||| |||||| Sbjct 16518 TGGATTTTAGCCTTGACATTTTCAATAGTGTCGGAAGGCTCAACTTCCAAGGTGATGGTT 16459 Query 15145 TTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 ||||| || |||||||| || || || ||||| Sbjct 16458 TTACCAGTTAGAGTTTTGACGAAGATCTGCAT 16427 >seq55885 Length=1496 Score = 107 bits (118), Expect = 1e-18 Identities = 152/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 14964 TAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTC 15023 ||| || ||||| || ||||| || || || || || || || | | | | | || Sbjct 362 TAACACCAAATGGAGTGTAGATTCCTTCTGAATATTATAGTCCGACAAAGTGCGGCCATC 303 Query 15024 TTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTC 15083 ||| |||||||| || ||| | || ||||||||||| || ||||| |||||||| || Sbjct 302 TTCCAATTGTTTACCGGCGAAAATTAAACGCTGTTGATCTGGGGGAATACCTTCCTTATC 243 Query 15084 ACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGT 15143 ||| ||| |||||| | || |||||||| | ||| || || ||||| ||||| Sbjct 242 CTGAATCTTGGCCTTTACATTCTCAATAGTATCAGAAGGTTCCACTTCCAAGGTGATGGT 183 Query 15144 TTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 ||| || |||| || || || ||||| |||||| Sbjct 182 TTTTCCAGTCAAGGTCTTGACGAAAATCTGCATA 149 >seq145162 Length=2015 Score = 93.3 bits (102), Expect = 3e-14 Identities = 107/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 90624 AATATTTCCTAAATCGCCAACGTGTCGTTCAATGGCATTTGGTGCGCCGTGATCGCGTCC 90683 |||||| || |||||||| || |||| | | |||| ||||| || || || || Sbjct 1972 AATATTGCCCAAATCGCCTACATGTCTATTTTCGTCATTGGGTGCCCCATGTTCTTTACC 1913 Query 90684 GGTGGGATTAAAATGTTCGCCCGCAGATGTGCAACCGTTAGTTGTGTCACCAAATTCGTG 90743 ||||| || ||| || || || |||||||| ||||| ||||||||||||| || Sbjct 1912 ACATGGATTGAAGTGTGGACCAGCTGAGGTGCAACCATTAGTGTTGTCACCAAATTCATG 1853 Query 90744 CACATGAAAACCGTGCAAACCTTT 90767 |||||||||||||||||||| || Sbjct 1852 AACATGAAAACCGTGCAAACCCTT 1829 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356589037006895