Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neobellieria_20bullata_20[genbank_20GCA_5F001017455.1_202015-06-01] 184,347 sequences; 396,224,597 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq7894 122 8e-23 seq47065 102 8e-17 seq55885 86.0 6e-12 >seq7894 Length=2644 Score = 122 bits (134), Expect = 8e-23 Identities = 166/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || || ||||| |||||||| | ||||| |||||||||||||||||||| | Sbjct 2537 CCACCACGCAAACGCAATACCAAATGCAATGTAGATTCTTTTTGAATATTGTAATCAGAC 2478 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||| || || | ||||| |||||| |||| || || || ||||| ||||| Sbjct 2477 AATGTGCGCCCGTCTTCCAATTGTTTGCCAGCGAAGATTAAACGTTGTTGATCTGGAGGG 2418 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGC-TTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || || ||||||| | ||| ||| || || | | ||| | || || | | ||| || Sbjct 2417 ATTCCTTCCTTGT-CTTGAATTTTAGCTTTAACATTTTCAATAGTATCGGAAGGCTCAAC 2359 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 || | || | |||||||| ||||| || || ||||| || |||||| Sbjct 2358 CTCTAAAGTGATGGTTTTGCCAGTCAGTGTCTTGACAAAGATTTGCATG 2310 >seq47065 Length=7920 Score = 102 bits (112), Expect = 8e-17 Identities = 165/235 (70%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 126883 TGCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATC 126942 ||| ||||| || | || ||||| ||||| | || || || ||||| || |||||||| Sbjct 2885 TGCACCACCACGGAGGCGTAACACTAAATGCAAAGTTGATTCCTTTTGGATGTTGTAATC 2826 Query 126943 GCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGG 127002 | | || || ||| || | ||||||||||| | || | || |||||||| || Sbjct 2825 GGATAGGGTACGTCCATCTTCCAATTGTTTTCCAGCAAAAATTAGACGTTGCTGATCTGG 2766 Query 127003 AGGTATGCCCTCCTTGTCCGTGATTTTCTGCTT-GAGTTGTTCGACGGTGTCCGTACTCT 127061 || || ||||| |||||| ||| | | |||| || | ||||| || || | | | Sbjct 2765 TGGAATTCCCTCTTTGTCC-TGAATCTTGGCTTTGACATTTTCGATAGTATCAGAAGGTT 2707 Query 127062 CGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGC 127116 |||| || | || | || ||||| || || || ||||||||||||||||| || Sbjct 2706 CGACCTCAAGTGTAATGGTCTTGCCCGTTAGGGTCTTTACAAAAATCTGCATTGC 2652 >seq55885 Length=1496 Score = 86.0 bits (94), Expect = 6e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943 || || ||||| | || ||||||||||| | ||||| || || |||||||| || || Sbjct 379 GCGCCTCCGCGAAGACGTAACACCAAATGGAGTGTAGATTCCTTCTGAATATTATAGTCC 320 Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003 || ||||| ||| || | ||||| || ||| | || || ||||| ||||| || Sbjct 319 GACAAAGTGCGGCCATCTTCCAATTGTTTACCGGCGAAAATTAAACGCTGTTGATCTGGG 260 Query 127004 GGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCG 127063 || || || ||||| ||| || || ||| | | || | || || | | || Sbjct 259 GGAATACCTTCCTTATCCTGAATCTTGGCCTTTACATTCTCAATAGTATCAGAAGGTTCC 200 Query 127064 ACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||||| | ||| | ||||| || |||| || || || ||||||||||| Sbjct 199 ACTTCCAAGGTGATGGTTTTTCCAGTCAAGGTCTTGACGAAAATCTGCAT 150 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 474405085675280