Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neobellieria_20bullata_20[genbank_20GCA_5F001017455.1_202015-06-01] 184,347 sequences; 396,224,597 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq47065 141 8e-29 seq175855 118 1e-21 seq7894 104 2e-17 seq145162 93.3 4e-14 >seq47065 Length=7920 Score = 141 bits (156), Expect = 8e-29 Identities = 170/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 || || ||||| | ||||||| ||||| ||||||||||||||||| || |||||| Sbjct 2881 CCACCACGGAGGCGTAACACTAAATGCAAAGTTGATTCCTTTTGGATGTTGTAATCGGAT 2822 Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233 | ||| ||| |||||||||||||| || | || | |||||||| || || ||| Sbjct 2821 AGGGTACGTCCATCTTCCAATTGTTTTCCAGCAAAAATTAGACGTTGCTGATCTGGTGGA 2762 Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACT 45293 || || ||||| || ||||| || ||||| ||| | || || |||| ||||| Sbjct 2761 ATTCCCTCTTTGTCCTGAATCTTGGCTTTGACATTTTCGATAGTATCAGAAGGTTCGACC 2702 Query 45294 TCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATCGCG 45344 || || |||| || ||||| ||||| || ||||||||||| ||||| ||| Sbjct 2701 TCAAGTGTAATGGTCTTGCCCGTTAGGGTCTTTACAAAAATCTGCATTGCG 2651 >seq175855 Length=19510 Score = 118 bits (130), Expect = 1e-21 Identities = 145/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 45144 GTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCT 45203 || |||||||||||||| || || ||| | ||| | ||| |||||||| || || Sbjct 16623 GTGGATTCCTTTTGGATGTTGTAGTCGGACAAGGTGCGACCATCTTCCAATTGCTTACCA 16564 Query 45204 GCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTG 45263 ||| | ||||| ||||| || || || || || |||||||| ||||| ||||| ||| Sbjct 16563 GCGAAGATCAAACGTTGTTGATCTGGGGGGATACCTTCTTTGTCTTGGATTTTAGCCTTG 16504 Query 45264 ATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTT 45323 | ||| | |||||||||| ||| ||||| | || | ||||| || ||||||||| Sbjct 16503 ACATTTTCAATAGTGTCGGAAGGCTCAACTTCCAAGGTGATGGTTTTACCAGTTAGAGTT 16444 Query 45324 TTTACAAAAATTTGCATC 45341 || || || || |||||| Sbjct 16443 TTGACGAAGATCTGCATC 16426 >seq7894 Length=2644 Score = 104 bits (114), Expect = 2e-17 Identities = 153/215 (71%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 45128 CAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA-- 45185 ||| || | ||||| || ||||| ||||| ||||| ||||| ||| | | | Sbjct 2523 CAATACCAAATGCAATGTAGATTCTTTTTGAATATTGTAATCA--GACAATGTGCGCCCG 2466 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || ||||||||||| || ||| | || || ||||| || || || || || ||||| || Sbjct 2465 TCTTCCAATTGTTTGCCAGCGAAGATTAAACGTTGTTGATCTGGAGGGATTCCTTCCTTG 2406 Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305 ||||||||||| ||| | ||| | || ||||||| ||| || || | ||| | Sbjct 2405 TCTTGAATTTTAGCTTTAACATTTTCAATAGTATCGGAAGGCTCAACCTCTAAAGTGATG 2346 Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 |||||||| || || || || ||||| |||||||| Sbjct 2345 GTTTTGCCAGTCAGTGTCTTGACAAAGATTTGCAT 2311 Score = 93.3 bits (102), Expect = 4e-14 Identities = 145/205 (71%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 45137 ATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTG 45196 ||| || |||||||||||||| |||||||||||| | || || |||||||| Sbjct 2286 ATGAAGTGTTGATTCCTTTTGAATATTATAATCGGACAAAGTGCGTCCGTCTTCCAATTG 2227 Query 45197 TTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTT 45256 ||| || || | || || ||||| || || || || || || || |||||||||||||| Sbjct 2226 TTTGCCGGCAAAAATTAAACGTTGTTGATCTGGGGGGATACCCTCCTTATCTTGAATTTT 2167 Query 45257 TTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGG 45315 |||| || | || | || || |||| ||||| || | || | || ||||| | Sbjct 2166 AGCCTTGA-CGTTCTCAATAGTATCAGAAGGTTCGACCTCTAAGGTGATGGTCTTGCCAG 2108 Query 45316 TTAGAGTTTTTACAAAAATTTGCAT 45340 ||| ||| || || || || ||||| Sbjct 2107 TTAAAGTCTTCACGAAGATCTGCAT 2083 >seq145162 Length=2015 Score = 93.3 bits (102), Expect = 4e-14 Identities = 130/180 (72%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 102357 GCTTCAACGTTTCCCAAGTCGCCGACGTGCCGTATGATTGA-ATCGGGCGCACCATGATC 102415 ||||||| || ||||| ||||| || || | ||| | | || ||| || ||||| || Sbjct 1977 GCTTCAATATTGCCCAAATCGCCTACATGTC-TATTTTCGTCATTGGGTGCCCCATGTTC 1919 Query 102416 CATGTTGAACGGATTGAAATGTTCGCCGGCCGAGGTGCATCCGTTGCTCATGTCTCCGAA 102475 | | |||||||| ||| || || |||||||| || || | |||| || || Sbjct 1918 TTTACCACATGGATTGAAGTGTGGACCAGCTGAGGTGCAACCATTAGTGTTGTCACCAAA 1859 Query 102476 TTCGTGAACGTGAAAGCCGTGCAAACCTTTCGACAAACCGATTATGTAGCCAGTTATTAC 102535 ||| ||||| ||||| ||||||||||| || |||||||| | || | |||||||| ||| Sbjct 1858 TTCATGAACATGAAAACCGTGCAAACCCTTGGACAAACCATTAATTTCGCCAGTTACTAC 1799 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450961632076120