Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neobellieria_20bullata_20[genbank_20GCA_5F001017455.1_202015-06-01] 184,347 sequences; 396,224,597 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq74093 201 1e-46 seq175855 120 3e-22 seq7894 114 1e-20 seq47065 105 7e-18 seq55885 89.7 5e-13 >seq74093 Length=5834 Score = 201 bits (222), Expect = 1e-46 Identities = 387/569 (68%), Gaps = 4/569 (1%) Strand=Plus/Minus Query 132861 GCTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTC 132920 ||| || |||||||||||||| |||||||| || ||||| || || || |||||||| Sbjct 1692 GCTTGGACGTTGCACCAAATGTTTGAACATTAACACTGCAAAATCACAGTGTAAGCCCTC 1633 Query 132921 GTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAG 132980 || | || || | ||| || ||| || | |||||||| || || ||||| || | Sbjct 1632 ATCACGAGAGATCAATTCATTAGAGAATGTAAGACCGGGCATAAGACCACGTTTCTTCAA 1573 Query 132981 CCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCAC 133040 ||||||||| | |||||||| || ||||| | || || || || || ||||| | Sbjct 1572 CCAAAATATAGAAGCGAAACTTCCACTGAAGAATATACCTTCAACAGCAGCAAAAGCAAT 1513 Query 133041 CAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTT 133100 | ||| ||||| || | ||| ||| || |||||| | ||||| || || || Sbjct 1512 GATGCGTTCGCCAAAGTTTGCTGATTTTGAGGAAATCCAGGCTAAAGCCCAATCAGCTTT 1453 Query 133101 TTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACAAACGGAGTTTCTCTTCCGAGGA 133160 ||| ||| |||||| ||||| | ||| || || | | | | || | | | Sbjct 1452 ACGTTTAACGGCCGGCATTGTTTCAACGGCATTAAATAG--GTACTCTCGTTGGTCATTA 1395 Query 133161 ACGC--ACGTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCG 133218 | | |||||| || || | | |||||||| ||||| ||||| |||||||| Sbjct 1394 TCTGTAATGTAGGTATCAATCAAAATGCTGTACATTTCAGAGTGAACGTTTTCCATGGCT 1335 Query 133219 ATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCG 133278 |||||||| || || || || || ||||| || || ||||| || | ||| || || Sbjct 1334 ATTTGAAAACCATAGAAACAACGAGCCTCAGTAACTTGAACTTCCTGGGAGAAGCGTTCA 1275 Query 133279 ACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATG 133338 ||||||||||| ||||| || |||||| || || |||||||||| || || || Sbjct 1274 ACCAGATTTTCATTGACTATACCGTCGGAAGCAGCAAAAAAGGCCAAAACATGTGAAATA 1215 Query 133339 AAATGGCGCTCGTTGTCGTTCAAGCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACC 133398 ||||| || || |||||| | | | | ||| ||| | | || || || ||||| Sbjct 1214 AAATGACGTTCATTGTCGGTAAGTCTATTCCAATCGGACATATCAGAAGAGAGATCCACT 1155 Query 133399 TCCTCGACGGTCCAAAACGACGCCTCGGC 133427 || || || |||||||| || || || || Sbjct 1154 TCTTCTACAGTCCAAAAAGAGGCTTCAGC 1126 >seq175855 Length=19510 Score = 120 bits (132), Expect = 3e-22 Identities = 156/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| ||||| || || || |||||||||||| | || || ||| | || Sbjct 16427 ATGCAGATCTTCGTCAAAACTCTAACTGGTAAAACCATCACCTTGGAAGTTGAGCCTTCC 16486 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | ||| | || | ||||||| |||||||| || || ||| | || ||| Sbjct 16487 GACACTATTGAAAATGTCAAGGCTAAAATCCAAGACAAAGAAGGTATCCCCCCAGATCAA 16546 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 || || | || | ||| || || || |||| || | |||||| | |||||||||| Sbjct 16547 CAACGTTTGATCTTCGCTGGTAAGCAATTGGAAGATGGTCGCACCTTGTCCGACTACAAC 16606 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||||||||| | || | |||||||| || ||| Sbjct 16607 ATCCAAAAGGAATCCACTTTACATTTGGTTCTCCGT 16642 >seq7894 Length=2644 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || || || || || |||||||||||||| | || || ||| | || Sbjct 2311 ATGCAAATCTTTGTCAAGACACTGACTGGCAAAACCATCACTTTAGAGGTTGAGCCTTCC 2370 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || | | ||| |||||| ||||| | ||||| || ||||| || | || ||| Sbjct 2371 GATACTATTGAAAATGTTAAAGCTAAAATTCAAGACAAGGAAGGAATCCCTCCAGATCAA 2430 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 || || | || | ||| |||||||| |||| |||| |||||| | || ||||| Sbjct 2431 CAACGTTTAATCTTCGCTGGCAAACAATTGGAAGACGGGCGCACATTGTCTGATTACAAT 2490 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 || ||||| ||| | || |||||||||| |||||||| | || ||| Sbjct 2491 ATTCAAAAAGAATCTACATTGCATTTGGTATTGCGTTTGCGTGGTGGC 2538 >seq47065 Length=7920 Score = 105 bits (116), Expect = 7e-18 Identities = 150/211 (71%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||| || || ||||| || || |||||||| ||||| || | || ||||| | | Sbjct 2654 AATGCAGATTTTTGTAAAGACCCTAACGGGCAAGACCATTACACTTGAGGTCGAACCTTC 2713 Query 38303 CGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || | | ||| | |||| || || | ||||||||||||||||| | || || Sbjct 2714 TGATACTATCGAAAATGTCAAAGCCAAGATTCAGGACAAAGAGGGAATTCCACCAGATCA 2773 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 || || || |||| || || ||||| |||| || | || ||||| ||| ||||| Sbjct 2774 GCAACGTCTAATTTTTGCTGGAAAACAATTGGAAGATGGACGTACCCTATCCGATTACAA 2833 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTG 38453 ||||||||||||| | || ||||||| ||| Sbjct 2834 CATCCAAAAGGAATCAACTTTGCATTTAGTG 2864 >seq55885 Length=1496 Score = 89.7 bits (98), Expect = 5e-13 Identities = 99/132 (75%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 38328 AAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAA 38387 || |||| ||||| || || |||||| | || ||||| || ||||| | ||| || ||| Sbjct 6 AAGATCCAAGACAAGGAAGGTATTCCCCCAGATCAACAACGTCTCATCTTCGCCGGTAAA 65 Query 38388 CAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCAT 38447 ||| |||| |||| || || | ||||||||| |||||||||||| | || || || Sbjct 66 CAGTTGGAGGACGGTCGTACTTTGTCCGACTACAATATCCAAAAGGAATCCACCCTTCAC 125 Query 38448 TTGGTGCTGCGT 38459 ||||| ||||| Sbjct 126 TTGGTATTGCGT 137 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499020233060480