Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neobellieria_20bullata_20[genbank_20GCA_5F001017455.1_202015-06-01] 184,347 sequences; 396,224,597 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq72925 87.8 2e-12 seq182292 86.0 7e-12 >seq72925 Length=5298 Score = 87.8 bits (96), Expect = 2e-12 Identities = 128/179 (72%), Gaps = 4/179 (2%) Strand=Plus/Plus Query 153252 CGAAACGTTCTTGAGAATCCTAGTTGG--TACACATCTTACACTCCCTATCAAGCTGAGA 153309 || ||| || |||||||||| | ||| |||||| || |||||||||||| | |||| Sbjct 4480 CGTAACATTTTTGAGAATCCCGGGTGGACTACACAA--TATACTCCCTATCAACCAGAGA 4537 Query 153310 TATCTCAGGGAAGATTGGAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTTACAG 153369 | | || || | || || | ||| | |||||||||||||| | | ||| | |||| Sbjct 4538 TTGCGCAAGGTCGTTTAGAGTCGTTACTAAATTACCAAACGCTTGTATCCGAAATGACAG 4597 Query 153370 GATTACCAATAGCAAACGCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATG 153428 | | |||| ||||| ||||| |||||||||| || || || || ||||| ||| Sbjct 4598 GCCTCGATGTAGCCAACGCCTCTCTTTTAGATGAAGGGACAGCTGCTGCGGAAGCTATG 4656 >seq182292 Length=1767 Score = 86.0 bits (94), Expect = 7e-12 Identities = 169/246 (69%), Gaps = 8/246 (3%) Strand=Plus/Minus Query 154863 CTGTCATGTATTATGATTACATACCCATCTACACATGGTGTATTTGAAACTAACATTAGA 154922 ||||| || | |||||||| || ||||||||| ||||| ||||| | || Sbjct 819 CTGTCCTGCCTCATGATTACCTATCCATCTACAATGGGTGTGTTTGAGGAGACTGTTG-- 762 Query 154923 CAGATATGTAAGATCGTTCATG-ACA---ATGGTGGTCAGGTATATCTTGATGGAGCAAA 154978 ||||||| | ||| || || ||| |||| || ||||| ||| | || || || || Sbjct 761 CAGATATTTGTGAT--TTAATTCACAGGCATGGAGGACAGGTTTATTTAGACGGTGCCAA 704 Query 154979 TCTAAATGCACAGGTAGGACTAGCAAAACCATGTGAGTATGGTGCAGATGTATGTCATCT 155038 | | || || ||||| || || || | || ||||| || || | ||| | Sbjct 703 TATGAACGCTCAGGTTGGCCTTTGTCGCCCCGGCGACTATGGCAGCGACGTTTCACATTT 644 Query 155039 AAACTTACATAAAACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTAT 155098 ||| | || ||||||||||||||||| ||||| ||||| ||||| ||| | ||||| || Sbjct 643 AAATCTGCACAAAACATTCTGTATTCCTCATGGTGGTGGTGGTCCCGGCATGGGTCCCAT 584 Query 155099 AGGTGT 155104 ||||| Sbjct 583 TGGTGT 578 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 577878098224480