Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neobellieria_20bullata_20[genbank_20GCA_5F001017455.1_202015-06-01] 184,347 sequences; 396,224,597 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq182292 109 6e-19 seq72925 96.9 4e-15 >seq182292 Length=1767 Score = 109 bits (120), Expect = 6e-19 Identities = 345/520 (66%), Gaps = 16/520 (3%) Strand=Plus/Minus Query 159268 TTATGTGATATCACAGGGTTTGATTCTATATCATTACAACCTAACGCAGGATCACAGGGT 159327 || ||||| || || |||| ||| || || || ||||| || | || | || ||| Sbjct 1089 TTGTGTGAAATTACGGGGTATGACAAAATTTCTTTTCAACCAAATTCTGGTGCTCAAGGT 1030 Query 159328 GAGTATGCAGGACTGTTAGCAATCCAAGCA--TACCATCAAGGATCAGGA-GATGATAAA 159384 || |||||||| || ||| || | ||| || ||| || ||| | || | | Sbjct 1029 GAATATGCAGGCTTGAGAGCTATAC--GCAGTTATCATGAAC-ATCGTAATGAAGGTTTT 973 Query 159385 AGAAATGTATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCATCAGCAGTGATG 159444 | ||| | || ||||| ||| || || || || || ||||| |||||||| ||| Sbjct 972 CGTAATATTTGCTTGATTCCAATATCTGCTCACGGTACCAATCCGGCATCAGCTCAAATG 913 Query 159445 GCAGGGATGAAAGTTGTAGGTGTCAAGTGTGAT-GATGATGGCAACATAGACATCAAAGA 159503 || || |||||||||| | | | | | | | ||| || | |||||| || | Sbjct 912 GCCGGCATGAAAGTTGAACCGAT-ACGCATTTTAGCTGACGGAAGCATAGATATGGTTCA 854 Query 159504 TCTAGAGAAGAAAGCAATCATGAATACATTTGAA--CTGTCATGTATTATGATTACATAT 159561 ||| | ||||| || |||| | | ||| ||||| || | |||||||| ||| Sbjct 853 TCTCCGCGACAAAGCT-TC-TGAACATGCTCGAAACCTGTCCTGCCTCATGATTACCTAT 796 Query 159562 CCATCTACACATGGTGTATTTGAAACAAACATCAGACAGATATGTAAGATTG--TTCATG 159619 ||||||||| ||||| ||||| | || | ||||||| | |||| |||| Sbjct 795 CCATCTACAATGGGTGTGTTTGAGG-AGACTGTTG-CAGATATTTGTGATTTAATTCACA 738 Query 159620 AGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTAGGTCTAGCAA 159679 | |||| || ||||| ||| | || ||||| ||| | || || ||||| || || Sbjct 737 GGCATGGAGGACAGGTTTATTTAGACGGTGCCAATATGAACGCTCAGGTTGGCCTTTGTC 678 Query 159680 AACCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATTC 159739 || | |||||||| || || | ||| |||| | || || ||||||||||||| Sbjct 677 GCCCCGGCGACTATGGCAGCGACGTTTCACATTTAAATCTGCACAAAACATTCTGTATTC 618 Query 159740 CACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGT 159779 | ||||| ||||| ||||| ||| | ||||| |||||||| Sbjct 617 CTCATGGTGGTGGTGGTCCCGGCATGGGTCCCATTGGTGT 578 >seq72925 Length=5298 Score = 96.9 bits (106), Expect = 4e-15 Identities = 136/186 (73%), Gaps = 9/186 (5%) Strand=Plus/Plus Query 157927 CGAAACGTTCTTGAGAATCCTAGTTGG--TACACATCTTACACTCCCTATCAAGCTGAGA 157984 || ||| || |||||||||| | ||| |||||| || |||||||||||| | |||| Sbjct 4480 CGTAACATTTTTGAGAATCCCGGGTGGACTACACAA--TATACTCCCTATCAACCAGAGA 4537 Query 157985 TATCTCAGGGAAGATTGGAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTCACAG 158044 | | || || | || || | ||| | |||||||||||||| | | ||| | |||| Sbjct 4538 TTGCGCAAGGTCGTTTAGAGTCGTTACTAAATTACCAAACGCTTGTATCCGAAATGACAG 4597 Query 158045 GACTACCGA--TAGCAAACGCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAAT 158102 | || ||| |||| ||||| ||||| |||||||||| || || || || ||||| || Sbjct 4598 GCCT--CGATGTAGCCAACGCCTCTCTTTTAGATGAAGGGACAGCTGCTGCGGAAGCTAT 4655 Query 158103 GCTGTT 158108 | |||| Sbjct 4656 G-TGTT 4660 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 586696131567920