Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neobellieria_20bullata_20[genbank_20GCA_5F001017455.1_202015-06-01] 184,347 sequences; 396,224,597 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq74093 345 5e-90 seq61086 86.0 7e-12 >seq74093 Length=5834 Score = 345 bits (382), Expect = 5e-90 Identities = 512/722 (71%), Gaps = 3/722 (0%) Strand=Plus/Minus Query 18773 ATCCTAATTCTAATAGTAGTCTATCCGCTACAAATTTAATATATGTGTTCATCATATCAC 18832 |||| ||||| | || || | ||| || ||||||| ||||||| | ||| | ||| Sbjct 1845 ATCC-AATTCCACTAATAAGCGATCAGCAACAAATTCAATATATTCGGACATTAATCCAC 1787 Query 18833 AATTCATTCCTATTAATTTAACAGGTAGTGCATCTGTAAGAAATTCTTGTTCTATATTTA 18892 ||||||| || ||||| | |||||| || ||||| || | || |||||||| || || | Sbjct 1786 AATTCATGCCAATTAAATCAACAGGCAGGGCATCAGTTAAGAACTCTTGTTCAATTTTAA 1727 Query 18893 CTGCCTCTGATATAATAGATACAACTCTATCTTCATTAGGAGGGTATAGAAGATGTTTAA 18952 | |||||||| ||||| | || || || | | ||| | | | | |||||| | Sbjct 1726 CAGCCTCTGAAATAATTTCAATAATCCTCTCCTTGCTTGGACGTTGCACCAAATGTTTGA 1667 Query 18953 ACATCAAACATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAA 19012 |||| || |||||||||||| |||| ||||| || | | |||||||||||||| | Sbjct 1666 ACATTAACACTGCAAAATCACAGTGTAAGCCCTCATCACGAGAGATCAATTCATTAGAGA 1607 Query 19013 ATGTTAAACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAG 19072 |||| | ||| ||||| || || | ||| || ||||| ||||||||||| || |||| Sbjct 1606 ATGTAAGACCGGGCATAAGACCACGTTTCTTCAACCAAAATATAGAAGCGAAACTTCCAC 1547 Query 19073 AAAAGAATATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCAT 19132 |||||||||||||| || || |||||||||| | | ||| ||| | | || | || Sbjct 1546 TGAAGAATATACCTTCAACAGCAGCAAAAGCAATGATGCGTTCGCCAAAGTTTGC-TGAT 1488 Query 19133 TATTATGAA-TCCATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCT 19191 | | | ||| |||| | ||||||||||| || ||| || |||||||| || Sbjct 1487 TTTGAGGAAATCCAGGCTAAAGCCCAATCAGCTTTACGTTTAACGGCCGGCATTGTTTCA 1428 Query 19192 ATAGAATTAAATAGATACATACGCTCATCTGTATCTTTAACATATGCATCTATCAATAAA 19251 | | ||||||||| ||| || | || ||||| ||| || | ||| ||||| | Sbjct 1427 ACGGCATTAAATAGGTACTCTCGTTGGTCATTATCTGTAATGTAGGTATCAATCAAAATG 1368 Query 19252 CTGTACATTTCTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCT 19311 ||||||||||| || |||| ||||| || || || ||||| || || ||||| | || Sbjct 1367 CTGTACATTTCAGAGTGAACGTTTTCCATGGCTATTTGAAAACCATAGAAACAACGAGCC 1308 Query 19312 TCTGTTATCTGTACTTCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCA 19371 || || | || ||||| | || | ||| |||| ||||||||| ||||| || || Sbjct 1307 TCAGTAACTTGAACTTCCTGGGAGAAGCGTTCAACCAGATTTTCATTGACTATACCGTCG 1248 Query 19372 CTAGCTGCAAAAAATGCTAATACATGTTTAATAAAATGTTTTTCATCTGAGGTTAATGTA 19431 ||| |||||||| || || |||||| ||||||||| ||||| ||| | | || Sbjct 1247 GAAGCAGCAAAAAAGGCCAAAACATGTGAAATAAAATGACGTTCATTGTCGGTAAGTCTA 1188 Query 19432 TTCCAATCATTAATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCT 19491 |||||||| ||||| ||| | ||| |||||||| || ||||||||||| || || Sbjct 1187 TTCCAATCGGACATATCAGAAGAGAGATCCACTTCTTCTACAGTCCAAAAAGAGGCTTCA 1128 Query 19492 GC 19493 || Sbjct 1127 GC 1126 >seq61086 Length=5849 Score = 86.0 bits (94), Expect = 7e-12 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 17244 GTAAAATAATTACCTGTCCAATTTGATGTGCCAATATACGCAGTTTTATCAGTTACCATG 17303 || ||||||| |||| |||||| |||||||||||||| ||||| |||||||| ||||| Sbjct 3382 GTGAAATAATCCCCTGACCAATTAGATGTGCCAATATAGGCAGTATTATCAGTGACCATA 3323 Query 17304 TATTTTGCATGATTTACTCTTGAATAAGGAAT 17335 ||||| ||| ||||||| ||| ||||| Sbjct 3322 TATTTATTATGGTTTACTCGACCATAGGGAAT 3291 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 560813511613080