Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neobellieria_20bullata_20[genbank_20GCA_5F001017455.1_202015-06-01] 184,347 sequences; 396,224,597 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq55885 118 8e-22 seq47065 96.9 3e-15 seq7894 91.5 1e-13 >seq55885 Length=1496 Score = 118 bits (130), Expect = 8e-22 Identities = 173/245 (71%), Gaps = 0/245 (0%) Strand=Plus/Minus Query 48522 ATGCAGATATAGTCGTCGCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTT 48581 ||| | || |||| | |||| || | || || ||||||||||| || || || || Sbjct 394 ATGAAAATTTAGTAGGCGCCTCCGCGAAGACGTAACACCAAATGGAGTGTAGATTCCTTC 335 Query 48582 TGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGT 48641 |||||||| || || || | | | || | || ||||| || |||||||| || || | Sbjct 334 TGAATATTATAGTCCGACAAAGTGCGGCCATCTTCCAATTGTTTACCGGCGAAAATTAAA 275 Query 48642 CGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACA 48701 ||||||||||| | ||||| || ||||| || |||||| |||||| | | | Sbjct 274 CGCTGTTGATCTGGGGGAATACCTTCCTTATCCTGAATCTTGGCCTTTACATTCTCAATA 215 Query 48702 GACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATC 48761 | || || | ||||| |||| || || |||||||| ||||| || || || |||||| Sbjct 214 GTATCAGAAGGTTCCACTTCCAAGGTGATGGTTTTTCCAGTCAAGGTCTTGACGAAAATC 155 Query 48762 TGCAT 48766 ||||| Sbjct 154 TGCAT 150 >seq47065 Length=7920 Score = 96.9 bits (106), Expect = 3e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || || ||||| ||||| | || || ||||| || |||||||| ||||| | || Sbjct 2872 AGGCGTAACACTAAATGCAAAGTTGATTCCTTTTGGATGTTGTAATCGGATAGGGTACGT 2813 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || ||||| || || || ||||| || || || || ||||| | |||| ||||| Sbjct 2812 CCATCTTCCAATTGTTTTCCAGCAAAAATTAGACGTTGCTGATCTGGTGGAATTCCCTCT 2753 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| |||||| ||| ||| | | || || || | || ||||| | ||| Sbjct 2752 TTGTCCTGAATCTTGGCTTTGACATTTTCGATAGTATCAGAAGGTTCGACCTCAAGTGTA 2693 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || || ||||| | || ||||||||||||||||| Sbjct 2692 ATGGTCTTGCCCGTTAGGGTCTTTACAAAAATCTGCAT 2655 >seq7894 Length=2644 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 48552 CGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCG 48611 ||||| |||||||| | || ||||||||||||||||||||||| | | || || Sbjct 2525 CGCAATACCAAATGCAATGTAGATTCTTTTTGAATATTGTAATCAGACAATGTGCGCCCG 2466 Query 48612 TCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTG 48671 || ||||| || || || || || || | || |||||||| | || | || |||||| Sbjct 2465 TCTTCCAATTGTTTGCCAGCGAAGATTAAACGTTGTTGATCTGGAGGGATTCCTTCCTTG 2406 Query 48672 TCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATC 48731 || ||| || ||| ||| | | || || || | ||| ||||| | || || Sbjct 2405 TCTTGAATTTTAGCTTTAACATTTTCAATAGTATCGGAAGGCTCAACCTCTAAAGTGATG 2346 Query 48732 GTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||||| || |||| || || ||||| || ||||| Sbjct 2345 GTTTTGCCAGTCAGTGTCTTGACAAAGATTTGCAT 2311 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380081736423081