Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neobellieria_20bullata_20[genbank_20GCA_5F001017455.1_202015-06-01] 184,347 sequences; 396,224,597 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq47065 100 2e-16 seq175855 98.7 8e-16 seq7894 96.9 3e-15 seq55885 86.0 5e-12 >seq47065 Length=7920 Score = 100 bits (110), Expect = 2e-16 Identities = 149/207 (72%), Gaps = 6/207 (3%) Strand=Plus/Plus Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612 |||||| || |||||||| || ||||||| || |||||||| || |||||||| Sbjct 2654 AATGCAGATTTTTGTAAAGACCCTAACGGGCAAGACCATTACACTTGAGGTCGAACCTTC 2713 Query 28613 AGAGACGGTGGCCGATCTCAA-GCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATC 28671 || || | | || |||| || || | || |||||||||||| | || ||||| Sbjct 2714 TGATACTATCGAAAATGTCAAAGCCAAGATTCAG-GACAAAGAGGGAATTCCACCAGATC 2772 Query 28672 AACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGAT--TCTAAAACTATGGCCGATTA 28729 | || | || || ||||| || ||||||||||||||| | | |||| ||||||| Sbjct 2773 AGCAACGTCTAATTTTTGCTGGAAAACAATTGGAAGATGGACGTACCCTAT--CCGATTA 2830 Query 28730 TAACATTCAAAAAGAATCTACTCTGCA 28756 ||||| ||||| ||||| ||| |||| Sbjct 2831 CAACATCCAAAAGGAATCAACTTTGCA 2857 >seq175855 Length=19510 Score = 98.7 bits (108), Expect = 8e-16 Identities = 154/219 (70%), Gaps = 1/219 (0%) Strand=Plus/Plus Query 28544 TTGTGTAAAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAAC 28603 |||| || | ||||| || || || ||||| |||| ||||||||||| ||| ||| Sbjct 16418 TTGT-TACAGATGCAGATCTTCGTCAAAACTCTAACTGGTAAAACCATCACCTTGGAAGT 16476 Query 28604 GGAACCTTCAGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCC 28663 || ||||| || || | | || ||||| |||||| |||||||| || | || Sbjct 16477 TGAGCCTTCCGACACTATTGAAAATGTCAAGGCTAAAATCCAAGACAAAGAAGGTATCCC 16536 Query 28664 CGTAGATCAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGC 28723 | ||||||||| | | ||||| || || || |||||||||||| | || || | Sbjct 16537 CCCAGATCAACAACGTTTGATCTTCGCTGGTAAGCAATTGGAAGATGGTCGCACCTTGTC 16596 Query 28724 CGATTATAACATTCAAAAAGAATCTACTCTGCACATGGT 28762 ||| || ||||| ||||| ||||| ||| | || |||| Sbjct 16597 CGACTACAACATCCAAAAGGAATCCACTTTACATTTGGT 16635 >seq7894 Length=2644 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 28550 AAAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACC 28609 ||||||||| || || || || || ||||| || || ||||| ||| || ||||| Sbjct 2079 AAAAATGCAGATCTTCGTGAAGACTTTAACTGGCAAGACCATCACCTTAGAGGTCGAACC 2138 Query 28610 TTCAGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGA 28669 ||| || || | | | ||||| ||||| || || ||||| | ||| ||| Sbjct 2139 TTCTGATACTATTGAGAACGTCAAGGCTAAAATTCAAGATAAGGAGGGTATCCCCCCAGA 2198 Query 28670 TCAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTA 28729 |||||| | | || ||||| ||||||||||||||||| ||| || ||||||| Sbjct 2199 TCAACAACGTTTAATTTTTGCCGGCAAACAATTGGAAGACGGACGCACTTTGTCCGATTA 2258 Query 28730 TAACATTCAAAAAGAATCTACTCTGCACATGGT 28762 ||| |||||||| ||||| || || || |||| Sbjct 2259 TAATATTCAAAAGGAATCAACACTTCATTTGGT 2291 Score = 89.7 bits (98), Expect = 4e-13 Identities = 160/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| ||||| || ||| | || || |||||||| || || || ||||| Sbjct 2311 ATGCAAATCTTTGTCAAGACACTGACTGGCAAAACCATCACTTTAGAGGTTGAGCCTTCC 2370 Query 28614 GAGACGGTGGCCGATCTCAA-GCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 || || | | || | || || |||| || ||||| || ||| | || |||||| Sbjct 2371 GATACTATTGAAAATGTTAAAGCTAAAATTCAA-GACAAGGAAGGAATCCCTCCAGATCA 2429 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732 ||| | | ||||| || ||||||||||||||||| || || | ||||| || Sbjct 2430 ACAACGTTTAATCTTCGCTGGCAAACAATTGGAAGACGGGCGCACATTGTCTGATTACAA 2489 Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 ||||||||||||||||| |||| ||||||| | || || || || || Sbjct 2490 TATTCAAAAAGAATCTACATTGCATTTGGTATTGCGTTTGCGTGGTGGCAT 2540 >seq55885 Length=1496 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 ||||| || || || || || || || || |||||||| ||| ||| ||||||||| Sbjct 150 ATGCAGATTTTCGTCAAGACCTTGACTGGAAAAACCATCACCTTGGAAGTGGAACCTTCT 209 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | || | ||| || || || || || || | ||| ||||||| Sbjct 210 GATACTATTGAGAATGTAAAGGCCAAGATTCAGGATAAGGAAGGTATTCCCCCAGATCAA 269 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 ||| | | || || || || ||||||||||||||| ||| || | || ||||| Sbjct 270 CAGCGTTTAATTTTCGCCGGTAAACAATTGGAAGATGGCCGCACTTTGTCGGACTATAAT 329 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGG 28780 ||||| || |||||||| || || |||| ||| | | || ||||| Sbjct 330 ATTCAGAAGGAATCTACACTCCATTTGGTGTTACGTCTTCGCGGAGG 376 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424449030672513