Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neobellieria_20bullata_20[genbank_20GCA_5F001017455.1_202015-06-01] 184,347 sequences; 396,224,597 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq7894 168 1e-36 seq55885 125 1e-23 seq47065 114 2e-20 >seq7894 Length=2644 Score = 168 bits (186), Expect = 1e-36 Identities = 179/236 (76%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||| || ||||| | ||| || | ||||| ||||||||||| ||||| |||||| Sbjct 2546 ATTTGCATGCCACCACGCAAACGCAATACCAAATGCAATGTAGATTCTTTTTGAATATTG 2487 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 || || || || || | || || |||||||| || || || ||||| | |||||| Sbjct 2486 TAATCAGACAATGTGCGCCCGTCTTCCAATTGTTTGCCAGCGAAGATTAAACGTTGTTGA 2427 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 || ||||| |||||||| || ||||| ||||| | ||| | |||| ||||||||||||| Sbjct 2426 TCTGGAGGGATTCCTTCCTTGTCTTGAATTTTAGCTTTAACATTTTCAATAGTATCGGAA 2367 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 | |||||| |||| ||| || ||||| || || || || || ||||| |||||||| Sbjct 2366 GGCTCAACCTCTAAAGTGATGGTTTTGCCAGTCAGTGTCTTGACAAAGATTTGCAT 2311 Score = 116 bits (128), Expect = 7e-21 Identities = 169/239 (71%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||| || ||||| | | || || |||| ||| | ||| | || || ||||||| Sbjct 2318 ATTTGCATGCCACCACGAAGACGTAGAACCAAATGAAGTGTTGATTCCTTTTGAATATTA 2259 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 || ||||| || || | || || |||||||| |||||||||||||| | |||||| Sbjct 2258 TAATCGGACAAAGTGCGTCCGTCTTCCAATTGTTTGCCGGCAAAAATTAAACGTTGTTGA 2199 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 || || || || || || |||||||| ||||| | || | || ||||||||| ||| Sbjct 2198 TCTGGGGGGATACCCTCCTTATCTTGAATTTTAGCCTTGACGTTCTCAATAGTATCAGAA 2139 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363 | || || |||| || || || || || |||| || || || || || |||||||| Sbjct 2138 GGTTCGACCTCTAAGGTGATGGTCTTGCCAGTTAAAGTCTTCACGAAGATCTGCATTTT 2080 Score = 107 bits (118), Expect = 3e-18 Identities = 86/104 (83%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 193257 CCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCT 193316 ||||| |||||||| ||||| | || | |||| |||||||||||||| ||||||||| Sbjct 2642 CCTTCCTTATCTTGGATTTTAGCCTTAACATTTTCAATAGTATCGGAAGGTTCAACTTCT 2583 Query 193317 AGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || ||||| ||||| || |||| ||||| |||||||||||||| Sbjct 2582 AGTGTTATTGTTTTTCCCGTTAATGTTTTAACAAATATTTGCAT 2539 >seq55885 Length=1496 Score = 125 bits (138), Expect = 1e-23 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 193152 ACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCGTCT 193211 |||| ||| | ||||| || || |||||||||||| || || || | ||| || Sbjct 358 ACCAAATGGAGTGTAGATTCCTTCTGAATATTATAGTCCGACAAAGTGCGGCCATCTTCC 299 Query 193212 AATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGT 193271 |||||||| ||||| |||||||| | ||||||||| || || || ||||| ||||| || Sbjct 298 AATTGTTTACCGGCGAAAATTAAACGCTGTTGATCTGGGGGAATACCTTCCTTATCCTGA 239 Query 193272 ATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTA 193331 || |||| |||| ||| ||||||||| |||| || ||||| | || || ||||| Sbjct 238 ATCTTGGCCTTTACATTCTCAATAGTATCAGAAGGTTCCACTTCCAAGGTGATGGTTTTT 179 Query 193332 CCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || | || || || || || ||||| Sbjct 178 CCAGTCAAGGTCTTGACGAAAATCTGCAT 150 >seq47065 Length=7920 Score = 114 bits (126), Expect = 2e-20 Identities = 135/183 (74%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 193179 ATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTC 193238 || || || ||||||| || | ||| || ||||||||||| |||||||||| | Sbjct 2836 ATGTTGTAATCGGATAGGGTACGTCCATCTTCCAATTGTTTTCCAGCAAAAATTAGACGT 2777 Query 193239 TGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTA 193298 || ||||| || || ||||| ||||| || || || |||| ||| | |||| |||||| Sbjct 2776 TGCTGATCTGGTGGAATTCCCTCTTTGTCCTGAATCTTGGCTTTGACATTTTCGATAGTA 2717 Query 193299 TCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGC 193358 || |||| || || || || || || || || || ||||| || |||||||| || ||| Sbjct 2716 TCAGAAGGTTCGACCTCAAGTGTAATGGTCTTGCCCGTTAGGGTCTTTACAAAAATCTGC 2657 Query 193359 ATT 193361 ||| Sbjct 2656 ATT 2654 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 897581292629040