Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neobellieria_20bullata_20[genbank_20GCA_5F001017455.1_202015-06-01] 184,347 sequences; 396,224,597 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq175855 147 2e-30 seq7894 136 4e-27 seq47065 118 1e-21 seq55885 111 1e-19 >seq175855 Length=19510 Score = 147 bits (162), Expect = 2e-30 Identities = 164/218 (75%), Gaps = 1/218 (0%) Strand=Plus/Plus Query 24696 TTGATAC-GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTA 24754 ||| ||| |||||||||||| | ||||| ||||| |||||||| || || | ||||| Sbjct 16418 TTGTTACAGATGCAGATCTTCGTCAAAACTCTAACTGGTAAAACCATCACCTTGGAAGTT 16477 Query 24755 GAAGCCACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCT 24814 || | ||||||| | |||| || || || ||||||||||||||||| || || Sbjct 16478 GAGCCTTCCGACACTATTGAAAATGTCAAGGCTAAAATCCAAGACAAAGAAGGTATCCCC 16537 Query 24815 CCCGATCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCA 24874 || |||||||||||||||||||| || || || || |||| ||| | | | |||| Sbjct 16538 CCAGATCAACAACGTTTGATCTTCGCTGGTAAGCAATTGGAAGATGGTCGCACCTTGTCC 16597 Query 24875 GATTATAACATTCAAAAGGAATCGACACTACACTTGGT 24912 || || ||||| ||||||||||| || |||| ||||| Sbjct 16598 GACTACAACATCCAAAAGGAATCCACTTTACATTTGGT 16635 >seq7894 Length=2644 Score = 136 bits (150), Expect = 4e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| |||||| | || || || || || ||||| || || | || || || | || Sbjct 2311 ATGCAAATCTTTGTCAAGACACTGACTGGCAAAACCATCACTTTAGAGGTTGAGCCTTCC 2370 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | |||| || ||| || || |||||||| |||||||| ||||| |||||| Sbjct 2371 GATACTATTGAAAATGTTAAAGCTAAAATTCAAGACAAGGAAGGAATCCCTCCAGATCAA 2430 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 |||||||| ||||| || || ||||| |||| || | | | |||| ||||| || Sbjct 2431 CAACGTTTAATCTTCGCTGGCAAACAATTGGAAGACGGGCGCACATTGTCTGATTACAAT 2490 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 |||||||| ||||| ||| | || ||||| ||||| ||||| || ||| Sbjct 2491 ATTCAAAAAGAATCTACATTGCATTTGGTATTGCGTTTGCGTGGTGGC 2538 Score = 107 bits (118), Expect = 2e-18 Identities = 155/213 (73%), Gaps = 8/213 (4%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || |||| || || || || || | || || ||| | | Sbjct 2083 ATGCAGATCTTCGTGAAGACTTTAACTGGCAAGACCATCACCTTAGAGGTCGAACCTTCT 2142 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || || | || |||| || | ||| || ||||| || || || || || || ||||| Sbjct 2143 GATACTATTGAGAACGTCAAGGCTAAA-ATTCAAGATAAGGAGGGTATCCCCCCAGATCA 2201 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACA---TGTCAGATTA 24879 ||||||||| || |||||||| ||||| |||| || || || || |||| ||||| Sbjct 2202 ACAACGTTTAATTTTTGCCGGCAAACAATTGGAAGA--CG-GACGCACTTTGTCCGATTA 2258 Query 24880 TAACATTCAAAAGGAATCGACACTACACTTGGT 24912 ||| |||||||||||||| ||||| || ||||| Sbjct 2259 TAATATTCAAAAGGAATCAACACTTCATTTGGT 2291 >seq47065 Length=7920 Score = 118 bits (130), Expect = 1e-21 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| ||| | || || ||||| || || || ||||| || || || ||| | | Sbjct 2655 ATGCAGATTTTTGTAAAGACCCTAACGGGCAAGACCATTACACTTGAGGTCGAACCTTCT 2714 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | |||| || ||| ||||| || |||||||| ||||| || || ||||| Sbjct 2715 GATACTATCGAAAATGTCAAAGCCAAGATTCAGGACAAAGAGGGAATTCCACCAGATCAG 2774 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 |||||| | || ||||| || ||||| |||| ||| | | | | || ||||| ||| Sbjct 2775 CAACGTCTAATTTTTGCTGGAAAACAATTGGAAGATGGACGTACCCTATCCGATTACAAC 2834 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 || ||||||||||| || | || || ||||| || Sbjct 2835 ATCCAAAAGGAATCAACTTTGCATTTAGTGTTACG 2869 >seq55885 Length=1496 Score = 111 bits (122), Expect = 1e-19 Identities = 103/131 (79%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847 |||||||||||||| ||||| || || || |||||||||||| | ||||| ||||| ||| Sbjct 6 AAGATCCAAGACAAGGAAGGTATTCCCCCAGATCAACAACGTCTCATCTTCGCCGGTAAA 65 Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907 ||| ||||||| | | |||| || || || || ||||||||||| || || ||| Sbjct 66 CAGTTGGAGGACGGTCGTACTTTGTCCGACTACAATATCCAAAAGGAATCCACCCTTCAC 125 Query 24908 TTGGTGTTGCG 24918 ||||| ||||| Sbjct 126 TTGGTATTGCG 136 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448860884089160