Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neobellieria_20bullata_20[genbank_20GCA_5F001017455.1_202015-06-01] 184,347 sequences; 396,224,597 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq7894 194 3e-44 seq47065 176 9e-39 seq55885 170 4e-37 seq175855 125 1e-23 >seq7894 Length=2644 Score = 194 bits (214), Expect = 3e-44 Identities = 179/227 (79%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || || | |||||||| || || |||| ||||||||||| || ||||| |||||||| Sbjct 2537 CCACCACGCAAACGCAATACCAAATGCAATGTAGATTCTTTTTGAATATTGTAATCAGAC 2478 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 | | | |||||||| | |||||| ||||| ||||||| | ||||||||||||||| Sbjct 2477 AATGTGCGCCCGTCTTCCAATTGTTTGCCAGCGAAGATTAAACGTTGTTGATCTGGAGGG 2418 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 ||||||||||| |||||||| || ||||| ||||||||||| ||||| ||| || || Sbjct 2417 ATTCCTTCCTTGTCTTGAATTTTAGCTTTAACATTTTCAATAGTATCGGAAGGCTCAACC 2358 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || ||||| || || ||||| |||| ||||| ||||| || ||||| Sbjct 2357 TCTAAAGTGATGGTTTTGCCAGTCAGTGTCTTGACAAAGATTTGCAT 2311 Score = 172 bits (190), Expect = 1e-37 Identities = 170/220 (77%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 ||| ||||| || || || || ||||| || || ||||||||||| || | | | | || Sbjct 2298 ACGTAGAACCAAATGAAGTGTTGATTCCTTTTGAATATTATAATCGGACAAAGTGCGTCC 2239 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 |||||| | |||||| || ||||| |||| | |||||||||||| || || || ||||| Sbjct 2238 GTCTTCCAATTGTTTGCCGGCAAAAATTAAACGTTGTTGATCTGGGGGGATACCCTCCTT 2179 Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774 ||||||||| || || || || || ||||| |||||| |||||| || || || || || Sbjct 2178 ATCTTGAATTTTAGCCTTGACGTTCTCAATAGTATCAGAAGGTTCGACCTCTAAGGTGAT 2119 Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATTATT 82814 |||||||| || || ||||| || || ||||||||| || Sbjct 2118 GGTCTTGCCAGTTAAAGTCTTCACGAAGATCTGCATTTTT 2079 Score = 89.7 bits (98), Expect = 1e-12 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 82707 CCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCC 82766 |||||||||||||| || || || || ||||||||||| ||||| |||||| ||||| Sbjct 2642 CCTTCCTTATCTTGGATTTTAGCCTTAACATTTTCAATAGTATCGGAAGGTTCAACTTCT 2583 Query 82767 AAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | ||||| || || || || || || || |||||||| ||||| Sbjct 2582 AGTGTTATTGTTTTTCCCGTTAATGTTTTAACAAATATTTGCAT 2539 >seq47065 Length=7920 Score = 176 bits (194), Expect = 9e-39 Identities = 165/210 (79%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 82602 ACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCT 82661 ||||| |||| ||| ||||| || || || || ||||| ||||| | | || ||||| Sbjct 2863 ACTAAATGCAAAGTTGATTCCTTTTGGATGTTGTAATCGGATAGGGTACGTCCATCTTCC 2804 Query 82662 AGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGA 82721 | ||||||||||||||| ||||| | ||| |||||||| || ||||| || || || ||| Sbjct 2803 AATTGTTTTCCAGCAAAAATTAGACGTTGCTGATCTGGTGGAATTCCCTCTTTGTCCTGA 2744 Query 82722 ATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTG 82781 ||||| ||||| |||||||| || |||||| |||||| || || | || || |||||| Sbjct 2743 ATCTTGGCTTTGACATTTTCGATAGTATCAGAAGGTTCGACCTCAAGTGTAATGGTCTTG 2684 Query 82782 CCTGTCAACGTCTTTACAAATATCTGCATT 82811 || || | ||||||||||| ||||||||| Sbjct 2683 CCCGTTAGGGTCTTTACAAAAATCTGCATT 2654 >seq55885 Length=1496 Score = 170 bits (188), Expect = 4e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 ||||| | | ||| | || || || || |||||||| ||||| |||||||| || || Sbjct 376 CCTCCGCGAAGACGTAACACCAAATGGAGTGTAGATTCCTTCTGAATATTATAGTCCGAC 317 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 | | | | || ||||| | |||||| || || || |||| | ||||||||||| || Sbjct 316 AAAGTGCGGCCATCTTCCAATTGTTTACCGGCGAAAATTAAACGCTGTTGATCTGGGGGA 257 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || ||||||||||| |||||||| || |||||||| ||||| |||||| |||||| ||| Sbjct 256 ATACCTTCCTTATCCTGAATCTTGGCCTTTACATTCTCAATAGTATCAGAAGGTTCCACT 197 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||| || || || || || ||||| ||||| || || |||||||| Sbjct 196 TCCAAGGTGATGGTTTTTCCAGTCAAGGTCTTGACGAAAATCTGCAT 150 Score = 96.9 bits (106), Expect = 7e-15 Identities = 110/148 (74%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | | ||||| || ||||| || || ||||| || || ||||| || || | Sbjct 150 TACCACCACGGAGACGCAATACCAAGTGAAGGGTGGATTCCTTTTGGATATTGTAGTCGG 91 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | | | | | |||||| || | ||||| || || ||||| || | |||||||||||| | Sbjct 90 ACAAAGTACGACCGTCCTCCAACTGTTTACCGGCGAAGATGAGACGTTGTTGATCTGGGG 31 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGC 82729 | || |||||||| ||||| ||||| || Sbjct 30 GAATACCTTCCTTGTCTTGGATCTTAGC 3 >seq175855 Length=19510 Score = 125 bits (138), Expect = 1e-23 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | | ||| ||||| || || | ||| ||||| || || || || || || | Sbjct 16655 TACCACCACGAAGACGGAGAACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCGG 16596 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | | | | ||| ||||| | ||| || ||||| ||||| | | |||||||||||| | Sbjct 16595 ACAAGGTGCGACCATCTTCCAATTGCTTACCAGCGAAGATCAAACGTTGTTGATCTGGGG 16536 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || ||||| || ||||| || || || || ||||||||||| || || ||| || | Sbjct 16535 GGATACCTTCTTTGTCTTGGATTTTAGCCTTGACATTTTCAATAGTGTCGGAAGGCTCAA 16476 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||||| || || || || || || | || || || || |||||||| Sbjct 16475 CTTCCAAGGTGATGGTTTTACCAGTTAGAGTTTTGACGAAGATCTGCAT 16427 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 979508177233633