Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neobellieria_20bullata_20[genbank_20GCA_5F001017455.1_202015-06-01] 184,347 sequences; 396,224,597 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq175855 122 8e-23 seq7894 118 1e-21 seq55885 100 3e-16 seq47065 95.1 1e-14 >seq175855 Length=19510 Score = 122 bits (134), Expect = 8e-23 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 131914 AACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTC 131973 ||||||||||| | || || ||||| |||||||||||| || ||| || |||||| Sbjct 16636 AACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCGGACAAGGTGCGACCATCTTC 16577 Query 131974 GAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGT 132033 | || ||||| | |||| | ||| ||||||||||| || || |||||||| || Sbjct 16576 CAATTGCTTACCAGCGAAGATCAAACGTTGTTGATCTGGGGGGATACCTTCTTTGTCTTG 16517 Query 132034 AATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTT 132093 ||||| || | | ||| | ||| |||| ||||| ||||| | || | ||||| Sbjct 16516 GATTTTAGCCTTGACATTTTCAATAGTGTCGGAAGGCTCAACTTCCAAGGTGATGGTTTT 16457 Query 132094 ACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 |||||| |||||||| | ||| |||||||| Sbjct 16456 ACCAGTTAGAGTTTTGACGAAGATCTGCAT 16427 >seq7894 Length=2644 Score = 118 bits (130), Expect = 1e-21 Identities = 160/223 (72%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961 |||||| ||||| |||||||| | | || ||||||||||| ||||| || || || Sbjct 2532 ACGCAAACGCAATACCAAATGCAATGTAGATTCTTTTTGAATATTGTAATCAGACAATGT 2473 Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021 ||| ||||| | ||||| || | |||||| ||| |||||||||||||| || || Sbjct 2472 GCGCCCGTCTTCCAATTGTTTGCCAGCGAAGATTAAACGTTGTTGATCTGGAGGGATTCC 2413 Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081 ||| || || |||||| ||| | | ||| | |||||||| ||||| || || | Sbjct 2412 TTCCTTGTCTTGAATTTTAGCTTTAACATTTTCAATAGTATCGGAAGGCTCAACCTCTAA 2353 Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCATG 132124 || | ||||| |||||||| || || | || || |||||| Sbjct 2352 AGTGATGGTTTTGCCAGTCAGTGTCTTGACAAAGATTTGCATG 2310 Score = 82.4 bits (90), Expect = 7e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 131914 AACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTC 131973 ||||||||| | |||| || |||||||| || || ||| || || || ||||| Sbjct 2292 AACCAAATGAAGTGTTGATTCCTTTTGAATATTATAATCGGACAAAGTGCGTCCGTCTTC 2233 Query 131974 GAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGT 132033 | ||||| |||| | | |||| ||| ||||||||||| || || || || ||||| Sbjct 2232 CAATTGTTTGCCGGCAAAAATTAAACGTTGTTGATCTGGGGGGATACCCTCCTTATCTTG 2173 Query 132034 AATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTT 132093 |||||| || | | || | |||||| | || || || || | || | || || Sbjct 2172 AATTTTAGCCTTGACGTTCTCAATAGTATCAGAAGGTTCGACCTCTAAGGTGATGGTCTT 2113 Query 132094 ACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||||| | ||| || | ||| |||||||| Sbjct 2112 GCCAGTTAAAGTCTTCACGAAGATCTGCAT 2083 >seq55885 Length=1496 Score = 100 bits (110), Expect = 3e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 || || |||||||| | | || || || ||||| || ||||| || || || | Sbjct 364 CGTAACACCAAATGGAGTGTAGATTCCTTCTGAATATTATAGTCCGACAAAGTGCGGCCA 305 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 ||||| | |||||||||| | |||| ||||||||||||||| || || ||||| ||| Sbjct 304 TCTTCCAATTGTTTACCGGCGAAAATTAAACGCTGTTGATCTGGGGGAATACCTTCCTTA 245 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || ||| || || | | || | |||||| | || |||||||| | || | Sbjct 244 TCCTGAATCTTGGCCTTTACATTCTCAATAGTATCAGAAGGTTCCACTTCCAAGGTGATG 185 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||||| ||||||| || || | |||||||||||| Sbjct 184 GTTTTTCCAGTCAAGGTCTTGACGAAAATCTGCAT 150 >seq47065 Length=7920 Score = 95.1 bits (104), Expect = 1e-14 Identities = 154/222 (69%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961 ||| | ||| || || ||||| | |||| || ||||| |||||||| ||| | ||| Sbjct 2876 ACGGAGGCGTAACACTAAATGCAAAGTTGATTCCTTTTGGATGTTGTAATCGGATAGGGT 2817 Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021 ||| |||||| | ||||| || | | | |||||||| || |||||||| || || || Sbjct 2816 ACGTCCATCTTCCAATTGTTTTCCAGCAAAAATTAGACGTTGCTGATCTGGTGGAATTCC 2757 Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081 ||||| || ||| || ||| | | ||| | |||||| | || || || || | Sbjct 2756 CTCTTTGTCCTGAATCTTGGCTTTGACATTTTCGATAGTATCAGAAGGTTCGACCTCAAG 2697 Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || | || || || || || || |||| ||||||||||| Sbjct 2696 TGTAATGGTCTTGCCCGTTAGGGTCTTTACAAAAATCTGCAT 2655 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475512926938920