Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neobellieria_20bullata_20[genbank_20GCA_5F001017455.1_202015-06-01] 184,347 sequences; 396,224,597 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq7894 98.7 9e-16 seq47065 96.9 3e-15 >seq7894 Length=2644 Score = 98.7 bits (108), Expect = 9e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 25172 AACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCC 25231 || ||||| | || || || || ||||| || || | ||||| | || |||||| | Sbjct 2080 AAAATGCAGATCTTCGTGAAGACTTTAACTGGCAAGACCATCACCTTAGAGGTCGAACCT 2139 Query 25232 AACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGAT 25291 |||||||| ||| | || || |||||| ||||| |||||||| || || ||| Sbjct 2140 TCTGATACTATTGAGAACGTCAAGGCTAAAATTCAAGATAAGGAGGGTATCCCCCCAGAT 2199 Query 25292 CAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTAC 25351 || ||| | | |||| | |||||||||| | ||||| | | | | | |||||| Sbjct 2200 CAACAACGTTTAATTTTTGCCGGCAAACAATTGGAAGACGGACGCACTTTGTCCGATTAT 2259 Query 25352 AATATTCAAAAAGAATCCACCATTCATTTAGT 25383 ||||||||||| ||||| || ||||||| || Sbjct 2260 AATATTCAAAAGGAATCAACACTTCATTTGGT 2291 Score = 86.0 bits (94), Expect = 6e-12 Identities = 149/215 (69%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 25174 CATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAA 25233 ||||||| | ||||| || ||| | || || ||| | ||||| | || || || | Sbjct 2310 CATGCAAATCTTTGTCAAGACACTGACTGGCAAAACCATCACTTTAGAGGTTGAGCCTTC 2369 Query 25234 CGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCA 25293 ||||||||| || | || ||| |||||| || || || || || || || ||||| Sbjct 2370 CGATACTATTGAAAATGTTAAAGCTAAAATTCAAGACAAGGAAGGAATCCCTCCAGATCA 2429 Query 25294 GCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAA--TGTCAGCGATTAC 25351 ||| | | || | || ||||||||| | ||||| | | | |||| | ||||| Sbjct 2430 ACAACGTTTAATCTTCGCTGGCAAACAATTGGAAGACGGGCGCACATTGTCTG--ATTAC 2487 Query 25352 AATATTCAAAAAGAATCCACCATTCATTTAGTGTT 25386 ||||||||||||||||| || | ||||| || || Sbjct 2488 AATATTCAAAAAGAATCTACATTGCATTTGGTATT 2522 >seq47065 Length=7920 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 ||||| | |||||||| || |||| || || | || || | || |||||| | Sbjct 2655 ATGCAGATTTTTGTAAAGACCCTAACGGGCAAGACCATTACACTTGAGGTCGAACCTTCT 2714 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 ||||||||||| | || ||| || ||| || |||||||| || || || |||||| Sbjct 2715 GATACTATCGAAAATGTCAAAGCCAAGATTCAGGACAAAGAGGGAATTCCACCAGATCAG 2774 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 ||| | || |||| | || |||||| | ||||||| | | | ||||||||| Sbjct 2775 CAACGTCTAATTTTTGCTGGAAAACAATTGGAAGATGGACGTACCCTATCCGATTACAAC 2834 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTA 25387 || ||||| ||||| || | |||||||||||| Sbjct 2835 ATCCAAAAGGAATCAACTTTGCATTTAGTGTTA 2867 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 444068752283040