Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neobellieria_20bullata_20[genbank_20GCA_5F001017455.1_202015-06-01] 184,347 sequences; 396,224,597 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq74093 282 6e-71 >seq74093 Length=5834 Score = 282 bits (312), Expect = 6e-71 Identities = 487/704 (69%), Gaps = 9/704 (1%) Strand=Plus/Minus Query 39451 ATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGAGTTTAAC 39510 ||| ||||||||||| || ||| ||| | | |||||||||| || || | | ||| Sbjct 1824 ATCAGCAACAAATTCAATATATTCGGACATTAATCCACAATTCATGCCAATTAAATCAAC 1765 Query 39511 TGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTATTAT--CGAT 39568 || || || || |||| ||||||| ||| || | || ||||||| || || | || Sbjct 1764 AGGCAGGGCATCAGTTAAGAACTCTTGTTCAATTTTAACAGCCTCTGAAATAATTTCAAT 1705 Query 39569 GTTACTACCTCATCACTCGGTGGATGCAATAAATGTTTAAACATTAAGCAGGCGAAGTCA 39628 | || ||| | || || | |||| |||||||| |||||||| || || ||| Sbjct 1704 AATCCT--CTCCTTGCTTGGACGTTGCACCAAATGTTTGAACATTAACACTGCAAAATCA 1647 Query 39629 CAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGA 39688 || |||| ||||||||| | | || ||||| ||||| ||||| || || ||||| ||| Sbjct 1646 CAGTGTAAGCCCTCATCACGAGAGATCAATTCATTAGAGAATGTAAGACCGGGCATAAGA 1587 Query 39689 CCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACT 39748 ||||| || || | ||||||||| | ||| ||| |||| ||||| || ||||| || Sbjct 1586 CCACGTTTCTTCAACCAAAATATAGAAGCGAAACTTCCACTGAAGAATATACCTTCAACA 1527 Query 39749 GCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATTATGT----ATCCACTTCTG 39804 || ||||| |||| | | || || | ||| | ||| || ||||| Sbjct 1526 GCAGCAAAAGCAATGATGCGTTCGCCAAAGTTTGC-TGATTTTGAGGAAATCCAGGCTAA 1468 Query 39805 TGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGATAATG 39864 |||||||||||||| || || ||||||||||| | |||||||| || || | Sbjct 1467 AGCCCAATCAGCTTTACGTTTAACGGCCGGCATTGTTTCAACGGCATTAAATAGGTACTC 1408 Query 39865 TTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATTTCTGAATGGAT 39924 | || ||| ||||| ||| || ||||| || || | || |||||||| || || | Sbjct 1407 TCGTTGGTCATTATCTGTAATGTAGGTATCAATCAAAATGCTGTACATTTCAGAGTGAAC 1348 Query 39925 GTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTACCTCTGA 39984 |||||| || || || ||||| || || ||||| | || ||||||| ||| || || Sbjct 1347 GTTTTCCATGGCTATTTGAAAACCATAGAAACAACGAGCCTCAGTAACTTGAACTTCCTG 1288 Query 39985 ACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAATGCCAA 40044 | || | ||| ||| ||||||||| ||||| || || ||| |||||||| ||||| Sbjct 1287 GGAGAAGCGTTCAACCAGATTTTCATTGACTATACCGTCGGAAGCAGCAAAAAAGGCCAA 1228 Query 40045 TACATGTTTAATAAAATATTTTTCATCGGGTGTCAATTTATTCCAGTCATTGATATCTTT 40104 |||||| |||||||| ||||| | || | | ||||||| || ||||| Sbjct 1227 AACATGTGAAATAAAATGACGTTCATTGTCGGTAAGTCTATTCCAATCGGACATATCAGA 1168 Query 40105 TGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCT 40148 || | ||| |||||||| | |||||||| || || || |||| Sbjct 1167 AGAGAGATCCACTTCTTCTACAGTCCAAAAAGAGGCTTCAGCCT 1124 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 685325930293080