Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neobellieria_20bullata_20[genbank_20GCA_5F001017455.1_202015-06-01] 184,347 sequences; 396,224,597 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq74093 242 3e-59 seq181649 201 9e-47 seq82204 158 1e-33 >seq74093 Length=5834 Score = 242 bits (268), Expect = 3e-59 Identities = 494/722 (68%), Gaps = 20/722 (3%) Strand=Plus/Plus Query 43757 GCGTCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGACTTAGCACATTGGATTGCA 43816 || || |||||||| | ||||||||| ||| | || || | | |||||| | | Sbjct 1132 GCCTCTTTTTGGACTGTAGAAGAAGTGGATCTCTCTTCTGATATGTCCGATTGGAATAGA 1191 Query 43817 TTAAAACCACAA-GAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGA 43875 | | | |||| ||| |||||||| || |||||||| ||||||||||| ||| Sbjct 1192 CTTAC-CGACAATGAACGTCATTTTATTTCACATGTTTTGGCCTTTTTTGCTGCTTCCGA 1250 Query 43876 CGGGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTTCAATTACCAGAAGC 43935 ||| ||||||||||||||| ||||| || || | || ||||||||| | | || || Sbjct 1251 CGGTATAGTCAATGAAAATCTGGTTGAACGCTTCTCCCAGGAAGTTCAAGTTACTGAGGC 1310 Query 43936 ACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCT 43995 || ||||| ||||| |||||||| ||||| ||||| |||| || ||||||||||| | Sbjct 1311 TCGTTGTTTCTATGGTTTTCAAATAGCCATGGAAAACGTTCACTCTGAAATGTACAGCAT 1370 Query 43996 TCTGATAGATACGTACATCAAAGAT--GGGC--ACGAGAAGCATCGATTGTTTAATGCGA 44051 | |||| ||||| ||||| | |||| | | ||||| || | | | |||||||| Sbjct 1371 TTTGATTGATACCTACATTACAGATAATGACCAACGAG-AGTACC---TATTTAATGCCG 1426 Query 44052 TAGAAACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGATAAATTCAA 44111 | |||||| | || || |||||| |||||| || ||||| | ||||| |||| Sbjct 1427 TTGAAACAATGCCGGCCGTTAAACGTAAAGCTGATTGGGCTTTAGCCTGGATTTCCTCAA 1486 Query 44112 A---TGATTCTTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTT 44168 | | ||||| ||||| | | || ||||| | ||| ||||| || ||||| Sbjct 1487 AATCAGCAAACTTTGGCGAACGCATCATTGCTTTTGCTGCTGTTGAAGGTATATTCTTCA 1546 Query 44169 CAGGATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGT 44228 ||| || || | ||||||||||| |||||||| ||| | ||||| || | || | Sbjct 1547 GTGGAAGTTTCGCTTCTATATTTTGGTTGAAGAAACGTGGTCTTATGCCCGGTCTTACAT 1606 Query 44229 TTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTGTTAC 44288 | || ||||| || || ||||||||| |||||||| || |||||||| || | Sbjct 1607 TCTCTAATGAATTGATCTCTCGTGATGAGGGCTTACACTGTGATTTTGCAGTGTTAATGT 1666 Query 44289 TTGGATATCTAG-GAGACG-ATAAGCCTTCATGTAAGACAATTACAGATATTGTTGTAGA 44346 | | || | | | ||| ||| || | ||| |||| || ||| || ||| Sbjct 1667 TCAAACATTTGGTGCAACGTCCAAG----CAAG-GAGAGGATTATTGAAATTATTTCAGA 1721 Query 44347 GGCAGTAAAGATAGAACAAGAATTTATGACAACAGCATTACCTGTAAATTTAATAGGAAT 44406 ||| || || || |||||||| || | || || | ||||| ||||||| || || Sbjct 1722 GGCTGTTAAAATTGAACAAGAGTTCTTAACTGATGCCCTGCCTGTTGATTTAATTGGCAT 1781 Query 44407 GAATGAACTTTTGATGAACCAATATATTGAATACATTGCAGATCGTTTACTTTTGGAACT 44466 |||| || ||| | |||||||||||| |||| ||||| ||| | ||||| | Sbjct 1782 GAATTGTGGATTAATGTCCGAATATATTGAATTTGTTGCTGATCGCTTATTAGTGGAATT 1841 Query 44467 GG 44468 || Sbjct 1842 GG 1843 >seq181649 Length=1561 Score = 201 bits (222), Expect = 9e-47 Identities = 516/775 (67%), Gaps = 8/775 (1%) Strand=Plus/Plus Query 40649 TTCAATATTTGGATGTCAAAATA-GATACAATTTGAGAAATCAGTTTCCGTTGCTAACTA 40707 |||||| ||||| || | |||| | | || || ||||| ||||| || || |||| Sbjct 305 TTCAATTTTTGG-TGCCCAAATGCGTTTTGATATGCGAAATTCATTTCCATTACTGACTA 363 Query 40708 CaaaaaaaaTGTTTTGGAAAGGCATTGCAGAAGAACTGTTATGGTTTATCAAAGGTTGTA 40767 | || | | ||||||| || | | || |||||||| ||||||||||| | || || | Sbjct 364 CCAAGCGAGTATTTTGGAGAGCCGTGGCGGAAGAACTACTATGGTTTATCCATGGCTGCA 423 Query 40768 CTAATGCTAAGAAATTATCAGAAAGAGGAGTGCACATTTGGAATGCGCACAGTTCTAAAA 40827 | |||| || ||| ||| | | | || |||||| ||| | ||| | Sbjct 424 CCGATGCAAAAGTATTGCAAGAGAAAAACATTCATATTTGGGATGGTAATAGTGATCGGC 483 Query 40828 CATATTTGTCTAGCATAGGATTACAAGATAGGGATGAAGGTGATCTTGGTCCTGTTTATG 40887 || | || || |||| || ||| | || ||||| ||| | ||||| ||||||| Sbjct 484 AATTTCTGGATAAATTAGGTTTCACCGATCGTGAAGAAGGCGATTTGGGTCCAGTTTATG 543 Query 40888 GATTTCAGTCGCGACATTTTGGAGCAAAATATGACACTATGT-ACTCTGATTATACCAAT 40946 | ||||| | ||| |||||||| || || ||| |||| ||| || ||| || |||||| Sbjct 544 GTTTTCAATGGCGTCATTTTGGCGCCAAGTATCGCACT-TGTCACGATGACTACACCAAT 602 Query 40947 AAAGGAATGGATCAATT-ACAGTGCGTTATAGATACGATTAAATCCGATCCCGATAGCCG 41005 | ||| | |||||| | | || | || || |||| || || | || || ||| Sbjct 603 GAGGGAGTTGATCAACTGAAAGAG-GTAATCAATACCATACGCACCAACCCTAATGACCG 661 Query 41006 ACGTATAATATTGTGCGCGTGGAACCCAACGGACGTACATTTGATGGCATTGCCACCTTG 41065 ||| || ||| ||| || ||||| || || ||| ||||| ||||| || || Sbjct 662 ACGCATTATAATGTCTGCCTGGAATCCCGTTGATATACCCCAAATGGCTTTGCCTCCCTG 721 Query 41066 TCATTTGTTATGTCAGTTTTACGTTTGCAATGGTGAACTGTCATGTCAATTGTATCAAAG 41125 ||| | || || |||| || ||||||||||| || ||||| || |||||| | Sbjct 722 TCACTGTTTGGCGCAATTTTTTGTGGCTAATGGTGAACTATCCTGTCAGTTATATCAACG 781 Query 41126 ATCAGGTGACATGGGACTAGGGGTCCCGTTTAACATAGCGAGTTATGCTCTGCTCACGTA 41185 | || ||||| || || || |||||||| || || ||||||||||| || || Sbjct 782 TAGTGCGGATATGGGTCTTGGAGTGCCGTTTAATATCGCTTCGTATGCTCTGCTAACCTA 841 Query 41186 TATGATTGCACACGTTACCAATTTAAAACCTGGTGAATTTGTTCACACGTTAGGAGATGG 41245 ||||| || || ||||| ||| ||||| || |||||||| || || || ||| Sbjct 842 CATGATAGCCCATATTACCGGTTTGAAACCAGGAGAATTTGTGCATACTACTGGCGATAC 901 Query 41246 ACATATTTACATTAATCACATAGAGCCGTTAACAGAACAACTGACACGAAAACCTAGACC 41305 ||| | || | | ||||| || || || | ||||||| ||| |||| ||| | | Sbjct 902 TCATGTCTATAAAACGCACATTGAACCTTTGAAAGAACAATTGAAGCGAACACCACGTCA 961 Query 41306 ATTTCCAACGCTACTTATTAAACGCGCTGTTGAAAACATTGATGATTTT-TGCATCGATG 41364 |||||||| || | || ||| | | || || | || || |||||| | || |||| Sbjct 962 ATTTCCAAAATTAATAATAAAAAGAGAGGTCAAAGATATCGAAGATTTTAAGTAT-GATG 1020 Query 41365 ATTTTGTCGTTTGCGATTACAATCCGTACCCTAAAATCCACATGGACATGTCTGT 41419 | |||| || || ||||| || || || ||||| | ||| | ||| |||| Sbjct 1021 ACTTTGAAATTGTTGACTACAAACCCTATCCAAAAATTGAAATGCAAATGGCTGT 1075 >seq82204 Length=9092 Score = 158 bits (174), Expect = 1e-33 Identities = 239/335 (71%), Gaps = 14/335 (4%) Strand=Plus/Plus Query 19611 TGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGGTGTTAACCAACT 19670 ||| || |||||||| || || |||||| | || | ||| | || |||||| | ||| | Sbjct 4400 TGGTGTCCATGACACAGTGGTAAATCAATTGCTAGCTAAAATCGATGGTGTTGAACAATT 4459 Query 19671 GAATAATATTTTAGTTATTGGCATGACTAATAGACTGGAATTAATAGACAGCGCCTTATT 19730 |||||| |||||||||||||||||||| ||| | | || | || || || |||| Sbjct 4460 GAATAACATTTTAGTTATTGGCATGACAAATCGTCGTGACATGATCGATGATGCTCTATT 4519 Query 19731 ACGACCCGGTCGGTTGGAAATAAAGATCGAAATTAACTTACCCGATGAATGTGGACGTGT 19790 || |||||||| |||||| || | || ||||||| |||||| ||||| || ||||| Sbjct 4520 GCGTCCCGGTCGTTTGGAAGTACAAATGGAAATTAGTTTACCCAATGAACAGGGTCGTGT 4579 Query 19791 GGAAATTTTAAACATACATACATCAAC-CATGCGACAA---AATAACCTTTTAAATG-AC 19845 | |||| ||||| || ||||| | | | |||||| || ||||| || || || Sbjct 4580 GCAAATCTTAAATATCCATAC-TAAGCGCATGCGTGAATTCAATAA------AATTGCAC 4632 Query 19846 --GATGTAGATCTAGAAGAAATTGCAGCGGCTACCAAAAACTATAGCGGCGCAGAACTTG 19903 |||||||| ||||||||||||| ||| ||||| | || || || || | | Sbjct 4633 CAGATGTAGACTGCAAAGAAATTGCAGCTCTTACTAAAAATTTCAGTGGAGCTGAGTTGG 4692 Query 19904 AGGGATTAGTGAGGGCCGCCCAATCAATTGCAATG 19938 | ||||| || | || || ||||| | ||||||| Sbjct 4693 AAGGATTGGTTCGCGCTGCTCAATCTACTGCAATG 4727 Score = 123 bits (136), Expect = 2e-23 Identities = 201/288 (70%), Gaps = 6/288 (2%) Strand=Plus/Plus Query 19243 ATTGGAGGATTGAGTAAAGAGTTTTCTGAAATCTTTCGTAGAGCATTTGTGTCGCGTGTT 19302 ||||| || ||| ||||||||| || || ||| | ||||| |||| || || || Sbjct 3965 ATTGGTGGCTTGGATAAAGAGTTCAATGCCATTTTTAGGAGAGCTTTTGCTTCTCGAGTC 4024 Query 19303 TTTTCTGCAGATGTCATTAAACAATTGGGATGTAAACATGTTCGTGGACTTTTGCTTTAT 19362 ||| || |||| | | ||||||| || |||||||| ||| || | || | || Sbjct 4025 TTTCCTCCAGAGTTGGTGGAACAATTAGGTTGTAAACACGTTAAAGGTATATTATTGTAC 4084 Query 19363 GGGCCACCGGGTTGTGGAAAAACATTAATTGCGAGAGAACTTAGTAAA---TTACTTACA 19419 || ||||| ||| ||| ||||| || || || || || | | || ||| | | Sbjct 4085 GGTCCACCTGGTACTGGTAAAACTTTGATGGCACGACAAATCGGCAATATGTTAAATGCT 4144 Query 19420 AAACAACCTCCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCG 19479 ||||| |||||||| ||||| ||| ||||||| |||| || || ||| |||| Sbjct 4145 CGGGAACCT---AAAATTGTTAATGGCCCTCAAATCTTGGATAAGTACGTGGGTGAATCA 4201 Query 19480 GAAGAAAATGTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAA 19527 |||| ||| || ||||||||||||| || |||||||||||| | ||| Sbjct 4202 GAAGCCAATATAAGACGTTTGTTTGCCGAAGCTGAAGAAGAAGAGAAA 4249 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396563024053735