Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neobellieria_20bullata_20[genbank_20GCA_5F001017455.1_202015-06-01] 184,347 sequences; 396,224,597 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq7894 138 1e-27 seq175855 109 5e-19 seq55885 107 2e-18 >seq7894 Length=2644 Score = 138 bits (152), Expect = 1e-27 Identities = 168/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC 27078 |||| || ||||| |||||||||||||| || ||||| ||||||||||||||||| || Sbjct 2539 TGCCACCACGCAAACGCAATACCAAATGCAATGTAGATTCTTTTTGAATATTGTAATCAG 2480 Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138 || ||||| ||||||| | ||||| || ||| | || | ||| |||||||| || | Sbjct 2479 ACAATGTGCGCCCGTCTTCCAATTGTTTGCCAGCGAAGATTAAACGTTGTTGATCTGGAG 2420 Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198 | | || || || || || || ||| | |||| | ||| || | | |||| Sbjct 2419 GGATTCCTTCCTTGTCTTGAATTTTAGCTTTAACATTTTCAATAGTATCGGAAGGCTCAA 2360 Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | |||| ||| || | |||||| ||||| || || |||||||||||||| Sbjct 2359 CCTCTAAAGTGATGGTTTTGCCAGTCAGTGTCTTGACAAAGATTTGCAT 2311 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 |||||||| | || || || ||||||||||| || ||| || |||| ||||||| Sbjct 2291 ACCAAATGAAGTGTTGATTCCTTTTGAATATTATAATCGGACAAAGTGCGTCCGTCTTCC 2232 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 | ||||| ||||| |||| | ||| |||||||| || || | |||||| ||||| Sbjct 2231 AATTGTTTGCCGGCAAAAATTAAACGTTGTTGATCTGGGGGGATACCCTCCTTATCTTGA 2172 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 || || || | | | || | ||| || | | ||| || |||| || || | ||| Sbjct 2171 ATTTTAGCCTTGACGTTCTCAATAGTATCAGAAGGTTCGACCTCTAAGGTGATGGTCTTG 2112 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || | ||| ||||| ||||| ||||| Sbjct 2111 CCAGTTAAAGTCTTCACGAAGATCTGCAT 2083 >seq175855 Length=19510 Score = 109 bits (120), Expect = 5e-19 Identities = 169/239 (71%), Gaps = 3/239 (1%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||||||||| || || || ||||| || ||||||||| || | |||| | ||||| Sbjct 16635 ACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCGGACAAGGTGCGACCATCTTCC 16576 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 | || ||||| ||| | || | ||| |||||||| || || | ||| ||||| || | Sbjct 16575 AATTGCTTACCAGCGAAGATCAAACGTTGTTGATCTGGGGGGATACCTTCTTTGTCTTGG 16516 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 || || || | |||| | |||||| | | |||||||| | || || | ||| Sbjct 16515 ATTTTAGCCTTGACATTTTCAATAGTGTCGGAAGGCTCAACTTCCAAGGTGATGGTTTTA 16456 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATAGCTGCTA-AAAATTTATTAAACCTTATTA 27276 || || |||||||| || ||||| ||||| ||| | |||||| | |||| | |||| Sbjct 16455 CCAGTTAGAGTTTTGACGAAGATCTGCAT--CTGTAACAAAATTAAATAAAACACATTA 16399 >seq55885 Length=1496 Score = 107 bits (118), Expect = 2e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 27020 GCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCT 27079 ||||||||| | || || |||||||| | ||||| || || |||||||| ||||| Sbjct 377 GCCTCCGCGAAGACGTAACACCAAATGGAGTGTAGATTCCTTCTGAATATTATAGTCCGA 318 Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 || |||| | ||||| | |||||||||||| |||| | |||||||||||| || || Sbjct 317 CAAAGTGCGGCCATCTTCCAATTGTTTACCGGCGAAAATTAAACGCTGTTGATCTGGGGG 258 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 | ||| || ||||| |||||| || | | || | ||| || | | ||| || Sbjct 257 AATACCTTCCTTATCCTGAATCTTGGCCTTTACATTCTCAATAGTATCAGAAGGTTCCAC 198 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 ||| | || || | ||| || |||| || || || || || |||||| Sbjct 197 TTCCAAGGTGATGGTTTTTCCAGTCAAGGTCTTGACGAAAATCTGCATA 149 Score = 93.3 bits (102), Expect = 4e-14 Identities = 99/131 (76%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092 ||||||||||| || | || || || ||||| |||||||||||| || | || || Sbjct 136 CGCAATACCAAGTGAAGGGTGGATTCCTTTTGGATATTGTAGTCGGACAAAGTACGACCG 77 Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 || || | ||||||||||||| | |||||||| |||||||| || || | ||| || || Sbjct 76 TCCTCCAACTGTTTACCGGCGAAGATGAGACGTTGTTGATCTGGGGGAATACCTTCCTTG 17 Query 27153 TCGGCGATCTT 27163 || |||||| Sbjct 16 TCTTGGATCTT 6 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 423979687533864