Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neobellieria_20bullata_20[genbank_20GCA_5F001017455.1_202015-06-01] 184,347 sequences; 396,224,597 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq47065 190 2e-43 seq7894 152 6e-32 seq175855 143 3e-29 seq55885 134 2e-26 >seq47065 Length=7920 Score = 190 bits (210), Expect = 2e-43 Identities = 179/228 (79%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| || ||||| ||||| || || |||||||| ||||| |||||||| || | Sbjct 2654 AATGCAGATTTTTGTAAAGACCCTAACGGGCAAGACCATTACACTTGAGGTCGAACCTTC 2713 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||||| || | |||| | || || || ||||||||||| ||||||||||| ||||| || Sbjct 2714 TGATACTATCGAAAATGTCAAAGCCAAGATTCAGGACAAAGAGGGAATTCCACCAGATCA 2773 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 ||| ||||||||||||||||| || ||| | || |||| ||||||||| | || || || Sbjct 2774 GCAACGTCTAATTTTTGCTGGAAAACAATTGGAAGATGGACGTACCCTATCCGATTACAA 2833 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 ||||||||||||| ||| | ||| |||| || || || || ||||| Sbjct 2834 CATCCAAAAGGAATCAACTTTGCATTTAGTGTTACGCCTCCGTGGTGG 2881 >seq7894 Length=2644 Score = 152 bits (168), Expect = 6e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||||||||||||||| || || ||||| || || ||| | ||||||||| | Sbjct 2311 ATGCAAATCTTTGTCAAGACACTGACTGGCAAAACCATCACTTTAGAGGTTGAGCCTTCC 2370 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| |||| |||| | || ||||||||||| |||||||| ||||| |||||||| || Sbjct 2371 GATACTATTGAAAATGTTAAAGCTAAAATTCAAGACAAGGAAGGAATCCCTCCAGATCAA 2430 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || ||| |||| || ||||| || ||| | || || | || || | | || || ||| Sbjct 2431 CAACGTTTAATCTTCGCTGGCAAACAATTGGAAGACGGGCGCACATTGTCTGATTACAAT 2490 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | ||||| ||||| || | ||| | || |||||| | || ||||| Sbjct 2491 ATTCAAAAAGAATCTACATTGCATTTGGTATTGCGTTTGCGTGGTGG 2537 Score = 141 bits (156), Expect = 1e-28 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| ||||| || ||||| | || |||||||| || || | ||||| || | Sbjct 2082 AATGCAGATCTTCGTGAAGACTTTAACTGGCAAGACCATCACCTTAGAGGTCGAACCTTC 2141 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||||| |||| || | |||||||||||||| || |||||||| || || ||||| || Sbjct 2142 TGATACTATTGAGAACGTCAAGGCTAAAATTCAAGATAAGGAGGGTATCCCCCCAGATCA 2201 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 || ||| |||||||||| || || ||| | || || | || || | | || ||||| Sbjct 2202 ACAACGTTTAATTTTTGCCGGCAAACAATTGGAAGACGGACGCACTTTGTCCGATTATAA 2261 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | | ||||||||||| || |||||| | || | |||||||| ||||| Sbjct 2262 TATTCAAAAGGAATCAACACTTCATTTGGTTCTACGTCTTCGTGGTGG 2309 >seq175855 Length=19510 Score = 143 bits (158), Expect = 3e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| ||||| || || || || || || || || | || |||||| | Sbjct 16427 ATGCAGATCTTCGTCAAAACTCTAACTGGTAAAACCATCACCTTGGAAGTTGAGCCTTCC 16486 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| |||| | ||||||||||| || ||||| || || || || ||||| || Sbjct 16487 GACACTATTGAAAATGTCAAGGCTAAAATCCAAGACAAAGAAGGTATCCCCCCAGATCAA 16546 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || ||| | || || |||||||||||| | || |||| ||| ||| | | ||||| || Sbjct 16547 CAACGTTTGATCTTCGCTGGTAAGCAATTGGAAGATGGTCGCACCTTGTCCGACTACAAC 16606 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 ||||||||||||||||| | ||| | || | |||||||| ||||| Sbjct 16607 ATCCAAAAGGAATCCACTTTACATTTGGTTCTCCGTCTTCGTGGTGG 16653 >seq55885 Length=1496 Score = 134 bits (148), Expect = 2e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || |||||||| | || || || || || || | || || || | | Sbjct 150 ATGCAGATTTTCGTCAAGACCTTGACTGGAAAAACCATCACCTTGGAAGTGGAACCTTCT 209 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| |||| ||| | ||||| || |||||||| ||||| || ||||| ||||| || Sbjct 210 GATACTATTGAGAATGTAAAGGCCAAGATTCAGGATAAGGAAGGTATTCCCCCAGATCAA 269 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||| ||||||| || ||||| ||| | || |||| || || | | ||||||||| Sbjct 270 CAGCGTTTAATTTTCGCCGGTAAACAATTGGAAGATGGCCGCACTTTGTCGGACTATAAT 329 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || |||||||| || || ||| | || || ||||||||||| || Sbjct 330 ATTCAGAAGGAATCTACACTCCATTTGGTGTTACGTCTTCGCGGAGG 376 Score = 118 bits (130), Expect = 1e-21 Identities = 115/148 (78%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 27485 AGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTG 27544 ||||||| || || |||||||| || ||||| ||||| || || ||||| || || || | Sbjct 1 AGGCTAAGATCCAAGACAAGGAAGGTATTCCCCCAGATCAACAACGTCTCATCTTCGCCG 60 Query 27545 GTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTC 27604 |||| || | ||||| | |||||| | | ||||| ||| |||||||||||||||| | Sbjct 61 GTAAACAGTTGGAGGACGGTCGTACTTTGTCCGACTACAATATCCAAAAGGAATCCACCC 120 Query 27605 TTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| | || |||||||| || ||||| Sbjct 121 TTCACTTGGTATTGCGTCTCCGTGGTGG 148 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 568996212358640