Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neobellieria_20bullata_20[genbank_20GCA_5F001017455.1_202015-06-01] 184,347 sequences; 396,224,597 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq55885 116 2e-21 seq7894 114 8e-21 >seq55885 Length=1496 Score = 116 bits (128), Expect = 2e-21 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 34478 CGCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTG 34537 |||| || | |||||| |||||||||||||| || ||||| ||||| ||||| || | Sbjct 378 CGCCTCCGCGAAGACGTAACACCAAATGGAGTGTAGATTCCTTCTGAATATTATAGTCCG 319 Query 34538 AAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCG 34597 | | || || | ||||| | |||||||||||| || |||||||||||||| || || | Sbjct 318 ACAAAGTGCGGCCATCTTCCAATTGTTTACCGGCGAAAATTAAACGCTGTTGATCTGGGG 259 Query 34598 GCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCA 34657 | | || ||||| || ||||| |||| ||| || || |||| Sbjct 258 GAATACCTTCCTTATCCTGAATCTTGGCCTTTACATTCTCAATAGTATCAGAAGGTTCCA 199 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 |||||| ||| || ||||| || || || || || || ||||||||||| Sbjct 198 CTTCCAAGGTGATGGTTTTTCCAGTCAAGGTCTTGACGAAAATCTGCAT 150 >seq7894 Length=2644 Score = 114 bits (126), Expect = 8e-21 Identities = 166/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| || | |||||| | |||||||| || || ||||||||||| |||||||| || Sbjct 2310 GCCACCACGAAGACGTAGAACCAAATGAAGTGTTGATTCCTTTTGAATATTATAATCGGA 2251 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 | || || ||||||| | |||||| |||||||| |||||||| ||||| || || || Sbjct 2250 CAAAGTGCGTCCGTCTTCCAATTGTTTGCCGGCAAAAATTAAACGTTGTTGATCTGGGGG 2191 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCA 34657 | |||||||| ||| ||| ||| | || ||| | ||| || || || | Sbjct 2190 GATACCCTCCTTATCT-TGAATTTTAGCCTTGACGTTCTCAATAGTATCAGAAGGTTCGA 2132 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTT 34709 | || | ||| || || || || ||||| || ||||| || |||||||| || Sbjct 2131 CCTCTAAGGTGATGGTCTTGCCAGTTAAAGTCTTCACGAAGATCTGCATTTT 2080 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314022487860851