Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neobellieria_20bullata_20[genbank_20GCA_5F001017455.1_202015-06-01] 184,347 sequences; 396,224,597 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq7894 183 3e-41 seq175855 167 2e-36 seq47065 159 3e-34 seq55885 127 2e-24 >seq7894 Length=2644 Score = 183 bits (202), Expect = 3e-41 Identities = 179/231 (77%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 |||||| || ||||| || || ||||| ||||| | || ||| | || || || || || Sbjct 2310 CATGCAAATCTTTGTCAAGACACTGACTGGCAAAACCATCACTTTAGAGGTTGAGCCTTC 2369 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| | ||||| | || ||| |||||||||||||| ||||| || || || ||||| Sbjct 2370 CGATACTATTGAAAATGTTAAAGCTAAAATTCAAGACAAGGAAGGAATCCCTCCAGATCA 2429 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||| |||||||| | ||| |||||||||||||||||| | || | || |||||||| Sbjct 2430 ACAACGTTTAATCTTCGCTGGCAAACAATTGGAAGACGGGCGCACATTGTCTGATTACAA 2489 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||||||| || || || || |||||||| ||||||||||| |||||||| Sbjct 2490 TATTCAAAAAGAATCTACATTGCATTTGGTATTGCGTTTGCGTGGTGGCAT 2540 Score = 158 bits (174), Expect = 1e-33 Identities = 173/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || ||| | || |||||| | || || | || || ||||| || Sbjct 2083 ATGCAGATCTTCGTGAAGACTTTAACTGGCAAGACCATCACCTTAGAGGTCGAACCTTCT 2142 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||||| ||||| ||||||||||| || || || || || || |||||| Sbjct 2143 GATACTATTGAGAACGTCAAGGCTAAAATTCAAGATAAGGAGGGTATCCCCCCAGATCAA 2202 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || |||||||| | ||||||||||||||||||||| | || | |||||||| || Sbjct 2203 CAACGTTTAATTTTTGCCGGCAAACAATTGGAAGACGGACGCACTTTGTCCGATTATAAT 2262 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||||||||| || || | ||||||||| | ||| | || |||||||| Sbjct 2263 ATTCAAAAGGAATCAACACTTCATTTGGTTCTACGTCTTCGTGGTGGCAT 2312 >seq175855 Length=19510 Score = 167 bits (184), Expect = 2e-36 Identities = 175/230 (76%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || |||||||| || || || | || || | ||||| || || ||| Sbjct 16427 ATGCAGATCTTCGTCAAAACTCTAACTGGTAAAACCATCACCTTGGAAGTTGAGCCTTCC 16486 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | ||||| ||||| |||||||||||||| || || || |||||| Sbjct 16487 GACACTATTGAAAATGTCAAGGCTAAAATCCAAGACAAAGAAGGTATCCCCCCAGATCAA 16546 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || ||||| || | ||| || || ||||||||||| || ||| | ||||| |||||| Sbjct 16547 CAACGTTTGATCTTCGCTGGTAAGCAATTGGAAGATGGTCGCACCTTGTCCGACTACAAC 16606 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || |||||||| || || |||||||||||| | ||| | || ||||| || Sbjct 16607 ATCCAAAAGGAATCCACTTTACATTTGGTTCTCCGTCTTCGTGGTGGTAT 16656 >seq47065 Length=7920 Score = 159 bits (176), Expect = 3e-34 Identities = 174/231 (75%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 26984 CGCCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACC 27043 ||| |||||||| |||||||| || || || |||||| | ||||| ||||| || ||||| Sbjct 2651 CGCAATGCAGATTTTTGTAAAGACCCTAACGGGCAAGACCATTACACTTGAGGTCGAACC 2710 Query 27044 GTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGA 27103 || || | || || | |||||| || ||||| |||||||| || || ||||| || Sbjct 2711 TTCTGATACTATCGAAAATGTCAAAGCCAAGATTCAGGACAAAGAGGGAATTCCACCAGA 2770 Query 27104 TCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTA 27163 ||| || ||| |||| | || || |||||||||||||| | ||| | |||||||| Sbjct 2771 TCAGCAACGTCTAATTTTTGCTGGAAAACAATTGGAAGATGGACGTACCCTATCCGATTA 2830 Query 27164 CAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 |||||| |||||||| || || || ||||| || || || | || ||||| Sbjct 2831 CAACATCCAAAAGGAATCAACTTTGCATTTAGTGTTACGCCTCCGTGGTGG 2881 >seq55885 Length=1496 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || |||| || || | || || | ||||||||||| || Sbjct 150 ATGCAGATTTTCGTCAAGACCTTGACTGGAAAAACCATCACCTTGGAAGTGGAACCTTCT 209 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||||| || || || ||||| || || ||||| || || || |||||| Sbjct 210 GATACTATTGAGAATGTAAAGGCCAAGATTCAGGATAAGGAAGGTATTCCCCCAGATCAA 269 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||||||||| | |||||| |||||||||||||| | || | || || || || Sbjct 270 CAGCGTTTAATTTTCGCCGGTAAACAATTGGAAGATGGCCGCACTTTGTCGGACTATAAT 329 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215 ||||| ||||| || || | |||||||| || ||| | || || ||| Sbjct 330 ATTCAGAAGGAATCTACACTCCATTTGGTGTTACGTCTTCGCGGAGGC 377 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433944449001371