Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neobellieria_20bullata_20[genbank_20GCA_5F001017455.1_202015-06-01] 184,347 sequences; 396,224,597 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq47065 152 1e-31 seq175855 116 9e-21 seq7894 116 9e-21 seq55885 91.5 3e-13 >seq47065 Length=7920 Score = 152 bits (168), Expect = 1e-31 Identities = 153/199 (77%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 210917 AGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCC 210976 ||| || || ||||||||||| ||||| | ||||| | ||||||||||| || || || Sbjct 2852 AGTTGATTCCTTTTGGATGTTGTAATCGGATAGGGTACGTCCATCTTCCAATTGTTTTCC 2793 Query 210977 TGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTT 211036 || || || || ||||| || || || |||| ||| || |||||||| ||||| ||| Sbjct 2792 AGCAAAAATTAGACGTTGCTGATCTGGTGGAATTCCCTCTTTGTCCTGAATCTTGGCTTT 2733 Query 211037 CACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGT 211096 || |||||||| || ||||| ||| ||||| || || || ||||| ||||| || || Sbjct 2732 GACATTTTCGATAGTATCAGAAGGTTCGACCTCAAGTGTAATGGTCTTGCCCGTTAGGGT 2673 Query 211097 CTTTACAAACACCTGCATT 211115 ||||||||| | ||||||| Sbjct 2672 CTTTACAAAAATCTGCATT 2654 >seq175855 Length=19510 Score = 116 bits (128), Expect = 9e-21 Identities = 159/222 (72%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | || || | || | |||||| || ||||||||||| || || | | ||| Sbjct 16648 ACGAAGACGGAGAACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCGGACAAGGT 16589 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | |||||||||| ||||| || |||||||| | |||||||| || || || | || Sbjct 16588 GCGACCATCTTCCAATTGCTTACCAGCGAAGATCAAACGTTGTTGATCTGGGGGGATACC 16529 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||| ||||| ||||| || || || ||||| || ||||| || ||||| || | Sbjct 16528 TTCTTTGTCTTGGATTTTAGCCTTGACATTTTCAATAGTGTCGGAAGGCTCAACTTCCAA 16469 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| || || || || ||||| || || || | |||||| Sbjct 16468 GGTGATGGTTTTACCAGTTAGAGTTTTGACGAAGATCTGCAT 16427 >seq7894 Length=2644 Score = 116 bits (128), Expect = 9e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 210918 GTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCT 210977 || || |||||||| || || ||||| | | || | || ||||||| || ||||| Sbjct 2507 GTAGATTCTTTTTGAATATTGTAATCAGACAATGTGCGCCCGTCTTCCAATTGTTTGCCA 2448 Query 210978 GCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTC 211037 |||||||| | |||||||| || ||||| | |||||||||||| || || || ||| Sbjct 2447 GCGAAGATTAAACGTTGTTGATCTGGAGGGATTCCTTCCTTGTCTTGAATTTTAGCTTTA 2388 Query 211038 ACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTC 211097 || ||||| || || || || |||||||| | |||||| || || || || || ||| Sbjct 2387 ACATTTTCAATAGTATCGGAAGGCTCAACCTCTAAAGTGATGGTTTTGCCAGTCAGTGTC 2328 Query 211098 TTTACAAACACCTGCAT 211114 || ||||| | ||||| Sbjct 2327 TTGACAAAGATTTGCAT 2311 >seq55885 Length=1496 Score = 91.5 bits (100), Expect = 3e-13 Identities = 92/120 (77%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970 |||||| ||||| || |||||||| || || || | | || | || || |||| ||| Sbjct 125 GTGAAGGGTGGATTCCTTTTGGATATTGTAGTCGGACAAAGTACGACCGTCCTCCAACTG 66 Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030 || || |||||||| || |||||||| || || |||| ||||||||||| |||||||| Sbjct 65 TTTACCGGCGAAGATGAGACGTTGTTGATCTGGGGGAATACCTTCCTTGTCTTGGATCTT 6 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1156414145642655