Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neobellieria_20bullata_20[genbank_20GCA_5F001017455.1_202015-06-01] 184,347 sequences; 396,224,597 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq175855 140 8e-28 seq7894 125 2e-23 seq55885 123 6e-23 seq47065 102 2e-16 >seq175855 Length=19510 Score = 140 bits (154), Expect = 8e-28 Identities = 164/222 (74%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | || || | || | ||||||||| ||||||| ||||| |||| ||| || Sbjct 16648 ACGAAGACGGAGAACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCGGACAAGGT 16589 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | |||||||| | ||||| ||||||||||| | |||||||| || || || ||||| Sbjct 16588 GCGACCATCTTCCAATTGCTTACCAGCGAAGATCAAACGTTGTTGATCTGGGGGGATACC 16529 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||| ||||||||||| || ||| ||| ||| || ||||| || | || || || || Sbjct 16528 TTCTTTGTCTTGGATTTTAGCCTTGACATTTTCAATAGTGTCGGAAGGCTCAACTTCCAA 16469 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || || || || | |||||| | ||| | ||||| Sbjct 16468 GGTGATGGTTTTACCAGTTAGAGTTTTGACGAAGATCTGCAT 16427 >seq7894 Length=2644 Score = 125 bits (138), Expect = 2e-23 Identities = 148/198 (75%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 225517 GTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCA 225576 || ||||||||||| | ||||||||| | ||| || | ||| ||||| | || || ||| Sbjct 2507 GTAGATTCTTTTTGAATATTGTAATCAGACAATGTGCGCCCGTCTTCCAATTGTTTGCCA 2448 Query 225577 GCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGC-TT 225635 |||||||| | |||||||| || || || || |||||||||||||| || ||| || || Sbjct 2447 GCGAAGATTAAACGTTGTTGATCTGGAGGGATTCCTTCCTTGTCTTGAAT-TTTAGCTTT 2389 Query 225636 CACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGT 225695 ||| ||| || || || || | || || ||||| ||||| || ||||| |||| || Sbjct 2388 AACATTTTCAATAGTATCGGAAGGCTCAACCTCTAAAGTGATGGTTTTGCCAGTCAGTGT 2329 Query 225696 TTTTATGAACACTTGCAT 225713 || | || | |||||| Sbjct 2328 CTTGACAAAGATTTGCAT 2311 >seq55885 Length=1496 Score = 123 bits (136), Expect = 6e-23 Identities = 110/138 (80%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | || || | ||| || |||||||| ||||||| |||||| |||| |||||| Sbjct 143 ACGGAGACGCAATACCAAGTGAAGGGTGGATTCCTTTTGGATATTGTAGTCGGACAAAGT 84 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | || || || | ||| || || |||||||| || |||||||| || || |||||||| Sbjct 83 ACGACCGTCCTCCAACTGTTTACCGGCGAAGATGAGACGTTGTTGATCTGGGGGAATACC 24 Query 225612 TTCCTTGTCTTGGATCTT 225629 |||||||||||||||||| Sbjct 23 TTCCTTGTCTTGGATCTT 6 Score = 109 bits (120), Expect = 1e-18 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 225511 TGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGC 225570 ||||| || ||||| || || | ||| || || | |||||| | |||||||| | || Sbjct 352 TGGAGTGTAGATTCCTTCTGAATATTATAGTCCGACAAAGTGCGGCCATCTTCCAATTGT 293 Query 225571 TTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTT 225630 || || ||||| || | || ||||| || || |||||||||||||| || || ||||| Sbjct 292 TTACCGGCGAAAATTAAACGCTGTTGATCTGGGGGAATACCTTCCTTATCCTGAATCTTG 233 Query 225631 TGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTC 225690 ||| ||| || || || || || | |||||| || || ||||| || || || ||| Sbjct 232 GCCTTTACATTCTCAATAGTATCAGAAGGTTCCACTTCCAAGGTGATGGTTTTTCCAGTC 173 Query 225691 AAAGTTTTTATGAACACTTGCAT 225713 || || || | ||| | ||||| Sbjct 172 AAGGTCTTGACGAAAATCTGCAT 150 >seq47065 Length=7920 Score = 102 bits (112), Expect = 2e-16 Identities = 142/199 (71%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 225516 AGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCC 225575 ||| ||||| ||||||| |||||||||| | || | |||||||| | || || || Sbjct 2852 AGTTGATTCCTTTTGGATGTTGTAATCGGATAGGGTACGTCCATCTTCCAATTGTTTTCC 2793 Query 225576 AGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTT 225635 ||| || || || ||||| || || || ||||| || || ||||| || ||||| || Sbjct 2792 AGCAAAAATTAGACGTTGCTGATCTGGTGGAATTCCCTCTTTGTCCTGAATCTTGGCTTT 2733 Query 225636 CACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGT 225695 ||| |||||| || || || | ||| || || | || || ||||||||||| | || Sbjct 2732 GACATTTTCGATAGTATCAGAAGGTTCGACCTCAAGTGTAATGGTCTTGCCCGTTAGGGT 2673 Query 225696 TTTTATGAACACTTGCATT 225714 |||| || | |||||| Sbjct 2672 CTTTACAAAAATCTGCATT 2654 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1189714505776818