Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neobellieria_20bullata_20[genbank_20GCA_5F001017455.1_202015-06-01] 184,347 sequences; 396,224,597 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq74093 212 5e-50 >seq74093 Length=5834 Score = 212 bits (234), Expect = 5e-50 Identities = 481/712 (68%), Gaps = 16/712 (2%) Strand=Plus/Minus Query 4377 AATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATTAAT 4436 || || ||||| |||||||| ||||| | | ||| | | | || || || |||||||| Sbjct 1829 AAGCGATCAGCAACAAATTCAATATATTCGGACATTAATCCACAATTCATGCCAATTAAA 1770 Query 4437 CTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATTATA 4496 ||||| || || | || || ||||||||||| || | || || |||| || || Sbjct 1769 TCAACAGGCAGGGCATCAGTTAAGAACTCTTGTTCAATTTTAACAGCCTCTGAAATAATT 1710 Query 4497 TCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAAACAC-GCAAA 4555 || | || | || || ||| | || || | | |||| ||| ||| ||||| Sbjct 1709 TCAATAATCCTCTCCTTGCTTGGACGTTGCACCAAATGTTTGAACATTAA-CACTGCAAA 1651 Query 4556 ATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCAT 4615 |||||| || || || || || | |||| ||| ||||| || || | |||||||| Sbjct 1650 ATCACAGTGTAAGCCCTCATCACGAGAGATCAATTCATTAGAGAATGTAAGACCGGGCAT 1591 Query 4616 TAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTC 4675 | ||| | || || | ||||||||||| || || ||| |||||||| ||||| Sbjct 1590 AAGACCACGTTTCTTCAACCAAAATATAGAAGCGAAACTTCCACTGAAGAATATACCTTC 1531 Query 4676 TACGGCGGCAAACGCTACTAATCGGGACCCGAACGA--GCTGGCTTTGTCTTTAATCCAT 4733 || || ||||| || | | || | | | || | |||| |||| |||||| Sbjct 1530 AACAGCAGCAAAAGCAA-TGATGCGTTCGCCAAAGTTTGCTGATTTTGAGGA-AATCCAG 1473 Query 4734 TTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAATAAT 4793 ||| ||||| | |||||| |||||| ||| ||||| | | || ||||||| Sbjct 1472 GCTAAAGCCCAATCAGCTTTACGTTTAACGGCCGGCATTGTTTCAACGGCATTAAATAGG 1413 Query 4794 TTACTTT--TTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAG 4851 | ||| | || || ||| ||| || || || || | | ||| |||||||||| Sbjct 1412 T-ACTCTCGTTGGTCATTA-TCTGTAATGTAGGTATCAATCAAAATGCTGTACATTTCAG 1355 Query 4852 AATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAA 4911 | || | ||||| || || || ||||| || || || || | ||| || || ||||||| Sbjct 1354 AGTGAACGTTTTCCATGGCTATTTGAAAACCATAGAAACAACGAGCCTCAGTAACTTGAA 1295 Query 4912 CTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAA 4971 |||| | | || | ||| || | ||||| || ||||||||||| || ||||||| Sbjct 1294 CTTCCTGGGAGAAGCGTTCAACCAGATTTTCATTGACTATACCGTCGGAAGCAGCAAAAA 1235 Query 4972 ACGCCAAAACATGAGATATAAAGTACTGTTC---GTCAGGCTTAAGTTTTTTCCAGTGGG 5028 | ||||||||||| || ||||| | |||| ||| | ||||| | ||||| | || Sbjct 1234 AGGCCAAAACATGTGAAATAAAATGACGTTCATTGTCGG---TAAGTCTATTCCAATCGG 1178 Query 5029 GCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGC 5080 || ||| || | ||| |||||||| ||||||||||| || ||||| || Sbjct 1177 ACATATCAGAAGAGAGATCCACTTCTTCTACAGTCCAAAAAGAGGCTTCAGC 1126 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 426090135252551